Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GBN93_RS04465 Genome accession   NZ_CP045103
Coordinates   964053..964436 (+) Length   127 a.a.
NCBI ID   WP_004694493.1    Uniprot ID   A0A7H8SES6
Organism   Acinetobacter johnsonii strain AJ413     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 959053..969436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GBN93_RS04455 (GBN93_04465) - 961949..963076 (-) 1128 WP_234951388.1 efflux RND transporter periplasmic adaptor subunit -
  GBN93_RS04460 (GBN93_04470) - 963134..963772 (-) 639 WP_234965499.1 hypothetical protein -
  GBN93_RS04465 (GBN93_04475) pilG 964053..964436 (+) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  GBN93_RS04470 (GBN93_04480) - 964464..964832 (+) 369 WP_004694491.1 response regulator -
  GBN93_RS04475 (GBN93_04485) - 964838..965374 (+) 537 WP_004694490.1 chemotaxis protein CheW -
  GBN93_RS04480 (GBN93_04490) - 965425..967497 (+) 2073 WP_234965500.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14184.23 Da        Isoelectric Point: 4.8722

>NTDB_id=391950 GBN93_RS04465 WP_004694493.1 964053..964436(+) (pilG) [Acinetobacter johnsonii strain AJ413]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFDALSKIAQANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVVMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=391950 GBN93_RS04465 WP_004694493.1 964053..964436(+) (pilG) [Acinetobacter johnsonii strain AJ413]
ATGGACGATAAATTCCAGAATCTAAAAGTAATGGTCATTGATGATTCAAAAACCATTCGTCGTACAGCTGAAACATTATT
ACAACGTGAGGGTTGTGAAGTTGTGACTGCTGTCGATGGTTTTGACGCATTGTCAAAAATTGCTCAAGCCAATCCTGATA
TCGTATTTGTCGACATTATGATGCCACGACTAGATGGTTATCAAACGTGTGCATTAATCAAAAATTCACAAAATTATCAA
AATATTCCTGTCGTGATGCTCTCTAGCAAAGATGGTCTATTTGACCAAGCCAAAGGGCGTGTTGTCGGTTCAGATGAATA
TTTAACAAAGCCGTTTAGTAAAGATGAATTATTAAATGCGATTCGTAATCACGTTTCAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SES6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

39.316

92.126

0.362

Multiple sequence alignment