Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | GBN68_RS15050 | Genome accession | NZ_CP045101 |
| Coordinates | 3077301..3077957 (-) | Length | 218 a.a. |
| NCBI ID | WP_184117975.1 | Uniprot ID | - |
| Organism | Acinetobacter johnsonii strain AJ210 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3072301..3082957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBN68_RS15030 (GBN68_15040) | - | 3073380..3073862 (-) | 483 | WP_207778853.1 | shikimate kinase | - |
| GBN68_RS15035 (GBN68_15045) | pilQ | 3073951..3076035 (-) | 2085 | WP_234954452.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| GBN68_RS15040 (GBN68_15050) | pilP | 3076055..3076582 (-) | 528 | WP_094148569.1 | pilus assembly protein PilP | Machinery gene |
| GBN68_RS15045 (GBN68_15055) | pilO | 3076582..3077304 (-) | 723 | WP_234954454.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GBN68_RS15050 (GBN68_15060) | pilN | 3077301..3077957 (-) | 657 | WP_184117975.1 | PilN domain-containing protein | Machinery gene |
| GBN68_RS15055 (GBN68_15065) | pilM | 3077957..3079015 (-) | 1059 | WP_058870420.1 | pilus assembly protein PilM | Machinery gene |
| GBN68_RS15060 (GBN68_15070) | ponA | 3079182..3081710 (+) | 2529 | WP_234954456.1 | penicillin-binding protein PBP1a | - |
| GBN68_RS15065 (GBN68_15075) | - | 3081742..3082548 (-) | 807 | WP_234954458.1 | putative RNA methyltransferase | - |
Sequence
Protein
Download Length: 218 a.a. Molecular weight: 24166.60 Da Isoelectric Point: 5.1439
>NTDB_id=391928 GBN68_RS15050 WP_184117975.1 3077301..3077957(-) (pilN) [Acinetobacter johnsonii strain AJ210]
MAKINLLPWRDALREKRKKEFIAYCVGAALVGVLAVALAWFFYSQKLEDQEQANQLVVSTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQGQRPVAVRLVDEMVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLV
AEEKKDKAPSSIVPRVEEAYGTFVVTADLDEIAQPVAPDATAPEAASTVNNSTAGAAQ
MAKINLLPWRDALREKRKKEFIAYCVGAALVGVLAVALAWFFYSQKLEDQEQANQLVVSTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQGQRPVAVRLVDEMVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLV
AEEKKDKAPSSIVPRVEEAYGTFVVTADLDEIAQPVAPDATAPEAASTVNNSTAGAAQ
Nucleotide
Download Length: 657 bp
>NTDB_id=391928 GBN68_RS15050 WP_184117975.1 3077301..3077957(-) (pilN) [Acinetobacter johnsonii strain AJ210]
ATGGCAAAAATAAACCTACTCCCTTGGCGTGATGCGTTAAGAGAGAAACGAAAAAAAGAATTTATTGCCTATTGTGTTGG
GGCTGCATTAGTTGGGGTTTTAGCTGTTGCTTTGGCTTGGTTCTTTTACAGTCAAAAACTGGAAGATCAGGAACAGGCCA
ATCAGTTGGTGGTGAGTACCAATCAAAACTTAGATGTCCAATTAAAGTCGTTGGAAGGTCTGCAAGAACAGCGCAATGCA
ATTGTAGAGCGGATGAAGTTGATCCAAGGTTTGCAAGGTCAACGTCCTGTGGCTGTTCGTTTGGTCGATGAAATGGTACG
TGTCACGCCAAGTAATATGTACATTACTAAGTTTGTGCGCACAGGTGATAAATTTACTATTGAAGGGAAAGCGGAAAGCC
CGAATACAGTTGCGGAATTCTTACGAAATCTCGAAGCATCTGCGTGGTATCGCAATGCCTTTATGAATTCATTCTTGGTT
GCTGAAGAGAAAAAAGATAAAGCACCAAGTTCCATCGTGCCACGTGTTGAAGAAGCCTATGGCACCTTTGTGGTCACCGC
AGATTTAGATGAGATTGCACAGCCAGTAGCGCCTGATGCGACCGCACCTGAAGCCGCAAGTACAGTTAATAATTCAACAG
CGGGGGCAGCACAATGA
ATGGCAAAAATAAACCTACTCCCTTGGCGTGATGCGTTAAGAGAGAAACGAAAAAAAGAATTTATTGCCTATTGTGTTGG
GGCTGCATTAGTTGGGGTTTTAGCTGTTGCTTTGGCTTGGTTCTTTTACAGTCAAAAACTGGAAGATCAGGAACAGGCCA
ATCAGTTGGTGGTGAGTACCAATCAAAACTTAGATGTCCAATTAAAGTCGTTGGAAGGTCTGCAAGAACAGCGCAATGCA
ATTGTAGAGCGGATGAAGTTGATCCAAGGTTTGCAAGGTCAACGTCCTGTGGCTGTTCGTTTGGTCGATGAAATGGTACG
TGTCACGCCAAGTAATATGTACATTACTAAGTTTGTGCGCACAGGTGATAAATTTACTATTGAAGGGAAAGCGGAAAGCC
CGAATACAGTTGCGGAATTCTTACGAAATCTCGAAGCATCTGCGTGGTATCGCAATGCCTTTATGAATTCATTCTTGGTT
GCTGAAGAGAAAAAAGATAAAGCACCAAGTTCCATCGTGCCACGTGTTGAAGAAGCCTATGGCACCTTTGTGGTCACCGC
AGATTTAGATGAGATTGCACAGCCAGTAGCGCCTGATGCGACCGCACCTGAAGCCGCAAGTACAGTTAATAATTCAACAG
CGGGGGCAGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
69.856 |
95.872 |
0.67 |
| comN | Acinetobacter baylyi ADP1 |
73.604 |
90.367 |
0.665 |