Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   GBN68_RS11565 Genome accession   NZ_CP045101
Coordinates   2374062..2378540 (-) Length   1492 a.a.
NCBI ID   WP_234953864.1    Uniprot ID   -
Organism   Acinetobacter johnsonii strain AJ210     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2369062..2383540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GBN68_RS11535 (GBN68_11585) elsL 2370109..2370612 (-) 504 WP_087010468.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  GBN68_RS11540 (GBN68_11590) - 2370612..2371004 (-) 393 WP_148826485.1 YbaN family protein -
  GBN68_RS11545 (GBN68_11595) - 2371102..2371980 (+) 879 WP_234953862.1 DUF1853 family protein -
  GBN68_RS11550 (GBN68_11600) - 2372137..2372283 (+) 147 WP_126035781.1 entericidin A/B family lipoprotein -
  GBN68_RS11555 (GBN68_11605) dapE 2372402..2373535 (+) 1134 WP_026056444.1 succinyl-diaminopimelate desuccinylase -
  GBN68_RS11560 (GBN68_11610) - 2373602..2374057 (-) 456 WP_159153527.1 hypothetical protein -
  GBN68_RS11565 (GBN68_11615) chpA 2374062..2378540 (-) 4479 WP_234953864.1 Hpt domain-containing protein Regulator
  GBN68_RS11570 (GBN68_11620) - 2378706..2380778 (-) 2073 WP_004981158.1 methyl-accepting chemotaxis protein -
  GBN68_RS11575 (GBN68_11625) - 2380827..2381363 (-) 537 WP_004694490.1 chemotaxis protein CheW -
  GBN68_RS11580 (GBN68_11630) - 2381369..2381737 (-) 369 WP_004694491.1 response regulator -
  GBN68_RS11585 (GBN68_11635) pilG 2381766..2382149 (-) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  GBN68_RS11590 (GBN68_11640) - 2382430..2383068 (+) 639 WP_087010454.1 hypothetical protein -

Sequence


Protein


Download         Length: 1492 a.a.        Molecular weight: 166723.27 Da        Isoelectric Point: 4.3900

>NTDB_id=391914 GBN68_RS11565 WP_234953864.1 2374062..2378540(-) (chpA) [Acinetobacter johnsonii strain AJ210]
MKEILKHLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELDPLFEKWYAEPTHQETLLSIRRHFHTLKGSGRMVGAKSA
GETAWAVEDTLNRVISGAVPLTATVQKFAKTVFKLYQFKLYPIFKAVQEIDLDLRPLVLIGQQLQQNQSLEPALEELLQL
SNHLNSNDVVTELELSDIEVAESELQVADVSEQDDQVHDVLEETLAIFIEEAEDHLATIDQFLNADETKVQDYNGLIRAL
HTLRGSSSMAQIEHVFNASSKVENLFKTLVQEEIVSTSKEISLLTQYAEFVRDYLHVLGRGTNEQLDVIYATFTTAWDNY
GFSIEDVADELNPQGMVSKLIELNIDLLLDAEFEFDQRAKVEYPDYIQHLGEQAKQLLEFTNNRAAQGIHDFTSELYAGY
QALLEKPELLNVDYAYELFGQAHQEFIHLFDTLAAGQRVILTEEVHKVLNELMAFVQQDVESTSTTVTEPVAEAIVSGNT
LQPSLDLAQISQQIASDHQYKQSNTANTNFDDDLLDIFLEEAEELLMGMDQDLNTWSKNGNDTAALNNLMRYLHTLKGGA
NMISAPFIGSIAHELESIYERVIRQQIATTPQLISIIRLVQDDVADRIQVIRTEKVDYPATATINVLHNIQSLVEGTTVT
TTVSEPLVEAFVAAVEEPLSNIDRTIEAEAAAVESATAIEEPRVVENTDVTVVEQLDTPSLVQEEAVSAVEEAASLLSIV
EETFLEEAEEILATTDGLLKQWTEQRSDRSVLLQLQRAAHSLKGGARMAENEPVGAIAYELETTFEQFAVHNFSSNVYDP
LLQTAFEWLKQAIFKRDFSNYDGLKNSLASIDYVDVIAQLPTRVTQIDLLNAVPSFEFVQGDGTEPPAMLGEWKETTHLD
GGNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADF
DPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIVRQTA
STLNRPTELVVHNTEGELDRTILERLVTPFEHMLRNAIDHGIEDTEQRSAAKKSATGQIELNISRQGTDVIVSFKDDGKG
IDESTIKAKALNLGLIKADQVLDKQEILQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVTVESEIGLGTTFII
RVPTTVAVSDALMVKAGDQQYAIPLAQIDRIVRIAPTALDHYFHSKDDQFKIDGVSYKLRYLSEFLSNQPIPRLSNIGHS
LPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPVGQQFASIGAIAGATILGDGHVCLILDGQNIARQILSTKRVTHAADHR
DFGRHQDTRRLVMIVDDSVTVRKVTSRLLERQGFDIVTAKDGVDAMEQLESVKPDLMLLDIEMPRMDGFEVTNLVRHHEI
HQNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLLAEKQG

Nucleotide


Download         Length: 4479 bp        

>NTDB_id=391914 GBN68_RS11565 WP_234953864.1 2374062..2378540(-) (chpA) [Acinetobacter johnsonii strain AJ210]
ATGAAAGAAATATTAAAACATTTAGTTGAAACGACAACGCTTCCGGAAGATAGTTATCTAGATCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGTTAGATCCATTATTTGAAAAGTGGTACGCTGAACCGACCC
ATCAAGAAACTTTGTTGAGCATACGTCGTCACTTCCATACCTTAAAAGGCTCTGGTCGTATGGTGGGGGCAAAGTCAGCA
GGTGAAACAGCATGGGCGGTTGAAGATACCTTAAATCGTGTGATTTCAGGGGCTGTACCGCTTACGGCAACGGTTCAAAA
GTTTGCTAAAACAGTATTCAAACTGTATCAATTTAAACTGTACCCGATATTCAAAGCGGTACAGGAAATTGATCTTGATC
TTCGTCCATTGGTTTTAATTGGACAACAATTACAACAAAATCAAAGTTTAGAACCTGCTCTAGAAGAGTTGCTACAACTG
TCTAATCATCTAAATAGTAATGATGTCGTGACGGAATTAGAGCTGAGCGATATCGAAGTGGCTGAATCTGAGCTACAAGT
TGCAGACGTTTCTGAGCAGGATGATCAAGTGCATGATGTCCTTGAAGAAACTTTAGCGATCTTCATTGAAGAAGCGGAAG
ACCATTTAGCGACTATCGATCAGTTTTTAAATGCAGATGAAACCAAAGTACAAGATTACAATGGTTTAATCCGTGCTTTA
CATACATTGCGCGGTAGTTCGTCTATGGCGCAAATTGAGCATGTCTTTAATGCCAGCTCAAAAGTCGAAAATCTATTTAA
AACCTTGGTTCAAGAAGAGATCGTTTCTACCTCGAAGGAAATCTCTTTACTCACTCAATATGCTGAATTTGTACGTGACT
ATTTACACGTGCTTGGGCGTGGTACGAACGAACAGCTTGACGTGATTTACGCCACGTTCACTACGGCTTGGGATAACTAT
GGTTTCAGTATTGAAGACGTAGCTGATGAGCTAAACCCACAAGGTATGGTCTCGAAGCTGATCGAGTTAAATATTGACCT
GTTGCTTGATGCCGAGTTTGAGTTTGATCAGCGTGCTAAGGTTGAATATCCAGACTATATTCAGCACTTAGGTGAACAAG
CAAAACAATTGCTGGAATTCACCAATAACCGTGCTGCTCAAGGAATTCATGATTTTACTTCTGAGCTATACGCGGGTTAT
CAAGCCTTACTGGAAAAGCCAGAATTACTCAATGTAGACTATGCATACGAGTTATTTGGTCAGGCACATCAAGAATTTAT
CCATTTATTTGACACTTTAGCTGCGGGTCAGCGTGTCATTCTGACTGAAGAAGTGCATAAAGTTCTGAATGAATTAATGG
CCTTCGTACAGCAAGATGTTGAATCGACTTCGACGACGGTAACTGAACCTGTTGCTGAGGCTATTGTTTCTGGAAATACT
TTACAACCAAGCCTTGATCTTGCGCAGATTTCGCAGCAAATTGCATCGGATCATCAGTACAAGCAATCGAATACGGCCAA
TACCAATTTTGATGATGATTTGCTTGATATCTTCTTGGAAGAAGCTGAAGAATTATTGATGGGGATGGATCAGGATCTTA
ATACTTGGTCTAAAAATGGCAATGATACCGCGGCACTCAATAATTTAATGCGTTATTTGCACACCTTAAAAGGTGGTGCC
AATATGATTTCTGCACCTTTTATTGGTTCGATTGCACACGAATTAGAGTCTATTTATGAGCGTGTGATTCGTCAGCAAAT
AGCCACAACGCCACAGTTGATTAGCATCATTCGCTTAGTGCAGGATGATGTTGCAGACCGAATTCAGGTCATTCGCACGG
AGAAGGTTGATTATCCAGCAACAGCGACGATCAATGTACTGCATAACATTCAGAGCTTAGTTGAGGGTACGACTGTTACA
ACTACAGTATCCGAGCCTTTAGTTGAAGCGTTTGTTGCGGCAGTTGAAGAACCTTTATCTAATATAGATAGAACGATTGA
AGCTGAGGCAGCTGCGGTTGAGTCAGCAACTGCAATTGAAGAGCCGCGTGTAGTTGAGAACACGGACGTTACAGTCGTTG
AACAGCTGGATACTCCGTCACTTGTCCAAGAAGAAGCAGTCAGCGCTGTTGAAGAAGCAGCTAGTCTTTTATCAATTGTT
GAAGAAACTTTCTTGGAAGAAGCTGAAGAAATTTTAGCGACTACGGATGGCTTACTGAAACAGTGGACTGAACAACGAAG
TGACCGTAGTGTGTTACTACAATTGCAACGTGCCGCGCACAGCTTAAAAGGCGGCGCGCGTATGGCGGAGAATGAACCCG
TTGGTGCGATTGCTTATGAACTAGAAACCACATTTGAGCAATTTGCTGTACATAATTTCAGTTCAAACGTGTATGACCCA
TTATTGCAAACCGCATTTGAATGGTTAAAACAAGCCATCTTCAAACGTGATTTTAGTAATTATGATGGTTTGAAAAATAG
CTTAGCATCTATTGATTATGTGGATGTGATTGCGCAATTACCGACGCGTGTAACTCAAATTGATTTACTCAATGCGGTAC
CAAGTTTTGAGTTTGTGCAGGGTGATGGTACTGAGCCGCCAGCAATGCTGGGTGAGTGGAAAGAAACGACTCACTTGGAT
GGCGGTAATGAGATGATCCGTATCTCAGCTGATTTGGTTGAAAAAATGATCGACCTATCAGGTGAAAATGCAATTAACCG
TTCACGTATTGAAATGGATTTAGGTCAACTCGGCAATACGTTGAACGAGATGGAGCTTGCAATTAAGCGTTTGGCGGATC
AGTTACGTCGAATGGAAGGTGAGCTTGAGAGTCAAATTATTGCGAAACATGGTTCTGAAAACTCGCGCTATGCAGACTTT
GACCCCTTGGAGATGGACCAATATTCATCGCTCAATCAATTGTCCAAATCCTTAGCAGAATCGGCTTCGGATTTGGTCGA
CTTCAAGAGCACTTTGGCTGAAAAAATTCGTGATGCAGAAGGCTTGTTATTACAACAATCCCGTATTCAAGCGGAGATTC
AAGAAAGCTTAATGCGGACACGTTTGGTGCCGTTCTCACGTATGTTGCCGCGTTTACAACGTATTGTGCGTCAGACCGCC
TCAACCTTGAACCGTCCAACGGAATTGGTCGTTCATAACACTGAAGGTGAGTTAGACCGTACGATTCTTGAACGTTTGGT
AACACCATTTGAGCATATGCTACGTAACGCAATCGACCACGGTATTGAAGATACGGAACAACGTAGCGCTGCGAAAAAAT
CAGCGACAGGTCAAATTGAACTGAACATTAGTCGTCAAGGTACAGACGTTATCGTCAGTTTTAAAGATGATGGTAAGGGT
ATTGATGAAAGCACGATTAAAGCGAAAGCGCTAAATTTAGGTTTAATTAAAGCCGATCAAGTGCTAGATAAACAGGAAAT
CTTACAGTTTATTTTCCATCCGGGTTTCAGTACGGCCAAAGAAGTGACGCAAATTTCTGGACGTGGTGTCGGTCTTGATG
TGGTGCAAAGTGAAATTAAAGCACTGGGTGGACATGTCACGGTTGAATCGGAAATTGGACTGGGCACGACCTTCATTATT
CGTGTACCAACTACGGTAGCGGTGAGTGATGCCTTGATGGTAAAAGCCGGTGATCAACAATATGCGATTCCATTGGCGCA
GATTGATCGTATTGTGCGTATTGCTCCAACAGCACTGGATCACTATTTCCACAGCAAAGATGACCAATTCAAAATTGATG
GTGTGAGTTATAAACTGCGCTATTTATCTGAGTTTTTATCCAATCAGCCGATTCCACGTTTGAGTAATATTGGACATTCA
TTGCCGGTGTTGTTGATTAAAGGCAACAGTGGACAAACCATTGCATTATTGGTCGATCAGCTGATTGGTTCACGTGCGCA
AATTGTAGTGAAGCCAGTTGGACAACAGTTTGCCAGCATTGGTGCAATTGCGGGTGCAACGATCTTGGGTGATGGTCATG
TATGTTTGATTTTAGATGGTCAGAACATTGCACGTCAGATTTTAAGTACCAAGCGTGTAACGCATGCAGCTGATCATCGT
GACTTTGGTCGTCATCAGGATACGCGTCGTTTAGTGATGATTGTGGATGACTCGGTAACGGTTCGTAAGGTTACATCGCG
CTTATTAGAGCGCCAAGGCTTTGATATTGTGACAGCAAAAGACGGTGTCGATGCGATGGAGCAGCTTGAGAGTGTTAAAC
CAGACTTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTCGAAGTAACGAACTTGGTTCGTCACCACGAAATT
CACCAGAACTTGCCGATTATTATGATTACATCGCGTACGGGTGAAAAACACCGTGAACGTGCTTTCAGCTTGGGTGTGAC
ACACTACATGGGCAAACCGTTCCAAGAGGCAGAATTACTTGCCAACATTCAGCAGTTATTGGCTGAAAAGCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.935

100

0.62


Multiple sequence alignment