Detailed information NTG0391670

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: F9277_RS02340
• Genome accession: NZ_CP045070
• Coordinates: 469542..472928 (-)
• Length: 1128 a.a.
• NCBI ID: WP_009698734.1
• Uniprot ID: A0A9X3MHF7
• Organism: Vibrio harveyi strain WXL538
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 464542..477928

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F9277_RS02325 (F9277_02325)	-	464854..465879 (-)	1026	WP_009698735.1	ABC transporter permease	-
F9277_RS02330 (F9277_02330)	-	465882..466868 (-)	987	WP_005446316.1	ABC transporter permease	-
F9277_RS02335 (F9277_02335)	-	467039..468721 (-)	1683	WP_005446317.1	ABC transporter substrate-binding protein	-
F9277_RS02340 (F9277_02340)	chiS	469542..472928 (-)	3387	WP_009698734.1	response regulator	Regulator
F9277_RS02345 (F9277_02345)	-	472927..473160 (+)	234	WP_029790366.1	hypothetical protein	-
F9277_RS02350 (F9277_02350)	rsmC	473157..474182 (-)	1026	WP_009698733.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
F9277_RS02355 (F9277_02355)	-	474259..475344 (-)	1086	WP_005449176.1	AI-2E family transporter	-
F9277_RS02360 (F9277_02360)	hemL	475704..476999 (-)	1296	WP_005449175.1	glutamate-1-semialdehyde 2,1-aminomutase	-
F9277_RS02365 (F9277_02365)	erpA	477246..477587 (+)	342	WP_005449174.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127417.17 Da
• Isoelectric Point: 5.3912

>NTDB_id=391670 F9277_RS02340 WP_009698734.1 469542..472928(-) (chiS) [Vibrio harveyi strain WXL538]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGHDIDEARENAQQRYIKGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNYGTNLLTGRYKDTALGRTFKRLSEDVSARRKVNEDYTPVVVSDFDIENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIAEINRDSSIETLLVGSDHKPRTINTKQEEIQNSLEIVDKALAGDTEVGTYSNRLGEE
MIAAFAPIETRGLTWAIVVQLPEKEAFARVHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTERKDEIGRLAISFERMQRSIREKIQTIKQQNEELESNIKLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSSHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATVVDDQVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLANEEEIQATQSLAARGHFQIPEANFENNDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTISDGPETLALIEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLTKPFNKQELAARIQAHLTASKAEMRHIENKLLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDTMTHA
LEYWESVTGETKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KMQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=391670 F9277_RS02340 WP_009698734.1 469542..472928(-) (chiS) [Vibrio harveyi strain WXL538]
ATGTTTAAATTCTACAAAAAGCAGAAATTTAAGCGCCTGCAAAGCACGCTAATGACCGCGTTTTTGGTTCTTAGCATCAC
GCCACTGACGATCACTGCGATTTTCTTCCTGCAATCACACAGTAAAGATCTTCAAGAACAAAGCACATCGCACCTTCTTT
CAGTTCGTGATACCAAACAACAACAAATCATCGACTACTTTGCAGCTCAAGAGACTGAAGTCATGGGCTTCGTACGCTCC
GAACTTGCTTACGCCAGCGGCGGACGATTCTACGGTTTGGTCAATGCGTTTAGTCGCTTGGGTCACGATATTGATGAAGC
CAGAGAAAACGCACAGCAGCGCTATATCAAAGGCAGTGGCGATCAAATCAAAACCTCGATTTTACCGGAATCATCTAACT
ACGTTGGCAGCGAACGTTACCGCCTATTGCACAAACGTTACCACTGGGCATACCTAGAGCTGTTAAAGCGATCTGATTTT
AATGACATTTTATTGGTTGATATCGATGGTAATGTCACTTACTCAATCAATAAAGACGACAACTATGGCACTAACCTACT
GACAGGACGCTACAAAGATACGGCGCTAGGGCGCACCTTTAAACGTTTGTCTGAAGATGTGAGTGCACGTCGTAAGGTCA
ATGAAGATTACACGCCAGTTGTCGTGTCTGACTTTGATATCGAAAACGGTAAACAGGTCGCTTGGCTCGGCGCACCGATT
GTCCAACAAGGCTACCTGCACAGCTATGCGATGTTCCGCTTACCAAACAACGGCATTACTAAGCTTATTGCTGAAATCAA
CCGCGATTCCTCGATTGAAACCTTACTAGTGGGCAGCGATCATAAACCTCGCACCATTAACACCAAACAGGAAGAAATCC
AAAACAGCTTAGAGATTGTCGATAAAGCACTCGCAGGCGACACAGAAGTAGGTACTTACAGCAACCGCTTGGGTGAAGAG
ATGATTGCGGCATTTGCGCCAATTGAAACTCGCGGTCTAACTTGGGCGATTGTCGTACAACTTCCAGAAAAAGAAGCCTT
TGCTCGAGTCCACCAGCTCGAGAAGCTGTTTGTTATTGCGATGCTGATTGCGATCATCTTGGTTGTGATCGCCTCACACT
ACTTATCTAATTTCATCACCTCCCCGCTTCTTAAGCTGACTTGGGCAGCAGAGAAAGTATCTGCTGGTGATCTGGACGAA
ACGACCTTTAATACAGAGCGTAAAGATGAAATCGGTCGACTCGCGATCAGCTTTGAGCGCATGCAACGCTCAATTCGAGA
AAAGATCCAAACCATTAAGCAGCAAAATGAAGAGCTAGAAAGCAACATCAAATTGATCCAAAAGCAAAACGAAGAATTGC
AGTTGGCAGATAAGCTGAAAGATGAGTTCCTAGCGACAACCTCTCACGAGTTACGTACACCATTACACGGTATGGTCGGC
ATTGCAGAGACTTTAGTATCTGGTGCTAATGGTGCAATTCCTGCGAGTCAAAAATACCAATTGGATATCATCATCAAAAG
TGGTCAACGTTTGGCAAATCTTGTTGACGATTTATTGGATTACCACAAGATGCGCTATGGCAGCATGGATATCCAAAAAT
CGGCAGTGAGCCTAGCAAGTGCGACTCGCTTAGTGCTTGAGCTTTCAAGTCACCTACTAGGCAACAAGACGATTCGTATC
ATTAATCAGGTCCCTGCCGATCTAAAAGCGGTGTCTGCCGATCCACAACGCTTGGAACAAGTACTGTACAACCTAATTGG
TAATGCAATTAAATATACTTCTGAAGGTAAGATCGTAATTTCTGCTACCGTCGTGGACGATCAAGTCCGCGTACAAGTGG
TTGATACTGGTCAGGGGATCCCGGCTGAACATCTTGAGCATATCTTTGAACCTTTAATTCAAGCCGGCCAAGACGCTAGT
CGCTACCGTCAAGGCGCTGGTTTGGGTTTATCAATCAGCCGTCAACTTATCGAATTGATGGGTGGATCGTTATATGTAAG
TAGTCAACCAATGGTCGGCACTACATTTAGCTTTACTCTGCCACTTGCTAATGAAGAAGAGATTCAAGCAACACAGAGCC
TTGCGGCGCGTGGACACTTCCAAATTCCAGAAGCGAACTTTGAAAACAACGACGACTTATCATTACCAGAGAACCCTGAT
GGTCCGCTGTTGTATGTTGCTGATGACGAACCGGTTAACTTACGCGTTCTTGAAAGCTTCCTAAGGCTTGAAGGCTACCG
CGTACGCACTATTTCTGATGGTCCTGAAACACTTGCTTTAATCGAGCAAGAAAAACCAGAGTTGCTTCTACTCGATATCA
TGATGCCAGGCATGAGCGGCTACCAAGTATGTAGTGAGCTTAGAGAGACCTATGATCACGCAGAGCTTCCAATCATTATG
TTGACAGCATTAAGTCAGACAGAAGATCGAGTAAGAGGCTTCGAAGCAGGTGCGAATGACTACTTAACCAAGCCATTCAA
TAAGCAGGAACTCGCCGCACGTATTCAAGCGCACTTAACCGCAAGTAAAGCAGAAATGCGCCACATCGAGAACAAGTTAC
TGGAATCGGAGCTGCGCCAGCGTGCTGAAGTAGAAGCTAGCTTGCTTGAGACTCAAGGTCGATTATTAGAACAACTAGAA
TCAGCACCTGAAGCCATTATTTGCCTTCGCGAGGATCAACGTATTCGCTTTGCGAACGAAGCGGCATGTAAGCTATTTAA
ACGCAGCTTAGAGCAGTTAAAACGCTCTTCGGCAGATGAACTTATTGCACCTAAATTCCTGACAGTTAAACAACCACATT
ACTGTGGCAAGATTGATATTTACATCGAAGATATTCGTCAAAACATTGAAGCAGACATTCTCAAATTACCTGAAGGCTCT
GGTCTAGATGTTATGTACATCTTTAACGTAGGTGGTGGTGCAAACGCAGCTCGTATCCATAATCTAGAAACCGCGGTTGA
AGTTCTATCAAGTTATGCGTTTGATGGTGATAAAGACCAATTGCAGAAGCTGAAAGAACTTGGCGGTGAGTTTACTCGCC
TTGCAGATAAAGCATTGGGGAACAAGAAAGATAAACAAGAGCTGATGCGCGAAGTGTTGGTCGATACGATGACTCATGCA
TTGGAATACTGGGAATCAGTGACTGGAGAAACTAAGTTTGCTTTTGCGGAGCAAAGTGGTTTATGGCGTGTCTACCTCGA
CCGCAGTACGTTGCAAACTCGGACACTCGATAAATACATGCGCATTGAGACATTACCAAAAACACCGCGCTGGAGAACGG
TTCTAAGCTCAATCGAGTTCATTCTTGAGCACTGTAAAGAACAAAGCCCTGAACGAGCTTACATTGAAGCGCAACGCGAT
AAAATGCAAAGGCTCCTTACAAGTTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.705	100	0.768