Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   GBN67_RS10790 Genome accession   NZ_CP045051
Coordinates   2215240..2219718 (-) Length   1492 a.a.
NCBI ID   WP_234962863.1    Uniprot ID   -
Organism   Acinetobacter johnsonii strain AJ312     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2210240..2224718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GBN67_RS10760 (GBN67_10780) elsL 2211287..2211790 (-) 504 WP_151836371.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  GBN67_RS10765 (GBN67_10785) - 2211790..2212182 (-) 393 WP_062034333.1 YbaN family protein -
  GBN67_RS10770 (GBN67_10790) - 2212280..2213158 (+) 879 WP_159153526.1 DUF1853 family protein -
  GBN67_RS10775 (GBN67_10795) - 2213315..2213461 (+) 147 WP_126035781.1 entericidin A/B family lipoprotein -
  GBN67_RS10780 (GBN67_10800) dapE 2213580..2214713 (+) 1134 WP_026056444.1 succinyl-diaminopimelate desuccinylase -
  GBN67_RS10785 (GBN67_10805) - 2214780..2215235 (-) 456 WP_159153527.1 hypothetical protein -
  GBN67_RS10790 (GBN67_10810) chpA 2215240..2219718 (-) 4479 WP_234962863.1 Hpt domain-containing protein Regulator
  GBN67_RS10795 (GBN67_10815) - 2219884..2221956 (-) 2073 WP_234962864.1 methyl-accepting chemotaxis protein -
  GBN67_RS10800 (GBN67_10820) - 2222007..2222543 (-) 537 WP_004694490.1 chemotaxis protein CheW -
  GBN67_RS10805 (GBN67_10825) - 2222549..2222917 (-) 369 WP_004694491.1 response regulator -
  GBN67_RS10810 (GBN67_10830) pilG 2222946..2223329 (-) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  GBN67_RS10815 (GBN67_10835) - 2223610..2224248 (+) 639 WP_087010454.1 hypothetical protein -

Sequence


Protein


Download         Length: 1492 a.a.        Molecular weight: 166766.53 Da        Isoelectric Point: 4.4184

>NTDB_id=391533 GBN67_RS10790 WP_234962863.1 2215240..2219718(-) (chpA) [Acinetobacter johnsonii strain AJ312]
MKEILKHLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELDPLFEKWYAEPTHQETLLSIRRHFHTLKGSGRMVGAKSA
GETAWAVEDTLNRVISGAVPLTATVQKFAKTVFKLYQFKLYPTFKVMQKIDLDLRPLVLIGQQLQQNQSLEPALEELLQL
SNHLNSDDIVTGLELIDIEVAEFKPQVADVSEQDDQVHDVLEETLAIFIEEAEDHLATIDHFLNADEAKVQDYNGLIRAL
HTLRGSSSMAQIEHVFNASSKVENLFKTLVQEEIVSTSKEISLLTQYAEFVRDYLHVLGRGTNEQLDVIYATFTTAWDNY
GFSIEDVDDELNPQGMVSKLIELNIDLLLDAEFEFDQRTKVEYPDYIQHLGEQAKQLLEFTNNRAAQGIHDFTSELYAGY
QALLKKPELLNVDYAYELFGQAHQEFIHLFDTLAAGQRVILTEEVHKVLNELMAFVQQDVESTSTTVIELVAEAIVSGNT
LQPSLDLAQISQQIASDHQYKQSNTANTDFDDDLLDIFLEEAEELLMGMDQDLNTWSKNGNDTAALNNLMRYLHTLKGGA
NMISAPFIGSIAHELESIYERVIRQQIATTPQLISIIRLVQDDVADRIQVIRTDKVDYPATATINVLHNIQSLVEGTTVT
TTVSEPLVEAFVAAVEEPLSNIDRTIEAEAAAVESATAIEEPSVVDNTDVTVVEQLDTPSLVQEEAVSAVEEAASLLSIV
EETFLEEAEEILATTDGLLKQWTEQRSDRSVLLQLQRAAHSLKGGARMAENEPVGAIAYELETTFEQFAVHNFSSNVYDP
LLQTAFEWLKQAIFKRDFSNYDGLKNSLASIDYVDVIAQLPTRVTQIDLLNAVPSFEFVQGDGTEPPAMLGEWKETTHLD
GGNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADF
DPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIVRQTA
STLNRPTELVVHNTEGELDRTILERLVTPFEHMLRNAIDHGIEDTEQRSAAKKSATGQIELNISRQGTDVIVSFKDDGKG
IDESTIKAKALNLGLIKADQVLDKQEILQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVTVESEIGLGTTFII
RVPTTVAVSDALMVKAGDQQYAIPLAQIDRIVRIAPTALDHYFHSKDDQFKIDGVSYKLRYLSEFLSNQPIPRLSNIGHS
LPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPVGQQFASIGAIAGATILGDGHVCLILDGQNIARQILSTKRVTHAADHR
DFGRHQDTRRLVMIVDDSVTVRKVTSRLLERQGFDIVTAKDGVDAMEQLESVKPDLMLLDIEMPRMDGFEVTNLVRHHEI
HQNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLLAEKQG

Nucleotide


Download         Length: 4479 bp        

>NTDB_id=391533 GBN67_RS10790 WP_234962863.1 2215240..2219718(-) (chpA) [Acinetobacter johnsonii strain AJ312]
ATGAAAGAAATATTAAAACATTTAGTTGAAACGACAACGCTTCCGGAAGATAGTTATCTAGATCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGTTAGATCCATTATTTGAAAAGTGGTACGCTGAACCGACCC
ATCAAGAAACTTTGTTGAGCATACGCCGTCATTTCCATACCTTAAAAGGCTCTGGTCGTATGGTGGGGGCAAAGTCAGCA
GGTGAAACAGCGTGGGCAGTTGAAGATACCTTAAATCGTGTGATTTCAGGGGCTGTACCGCTTACGGCAACGGTTCAAAA
ATTTGCTAAAACAGTATTCAAACTGTACCAATTTAAACTGTACCCCACTTTTAAAGTGATGCAGAAAATTGATCTTGATC
TTCGTCCATTGGTTTTAATTGGACAACAATTACAACAAAATCAAAGCTTAGAGCCTGCACTAGAAGAGTTATTACAACTG
TCTAATCATCTAAATAGTGATGATATCGTGACGGGATTAGAACTGATCGATATCGAAGTGGCTGAGTTTAAACCACAAGT
TGCAGACGTTTCTGAACAGGATGATCAAGTGCATGATGTCCTAGAAGAAACTTTAGCGATCTTCATTGAAGAAGCGGAAG
ACCATTTAGCGACTATCGACCACTTCTTAAATGCAGATGAAGCCAAAGTACAAGATTACAATGGTTTAATCCGTGCTTTA
CATACATTGCGCGGTAGTTCGTCTATGGCGCAAATTGAGCATGTTTTTAATGCCAGCTCAAAAGTCGAAAATCTATTTAA
AACCTTGGTTCAAGAAGAGATCGTTTCTACTTCGAAGGAGATCTCTTTACTCACCCAATATGCTGAATTTGTGCGTGATT
ATTTACATGTGCTTGGGCGTGGTACGAACGAACAGCTTGATGTGATTTATGCTACGTTCACTACGGCTTGGGATAACTAT
GGTTTCAGTATAGAAGACGTAGACGATGAACTGAACCCACAAGGTATGGTCTCGAAGCTGATCGAGTTAAATATTGATCT
GTTGCTTGATGCCGAGTTTGAGTTTGATCAGCGTACTAAGGTTGAATATCCAGACTATATTCAGCACTTAGGTGAACAAG
CAAAACAATTGCTAGAATTTACCAATAACCGTGCTGCTCAAGGAATTCATGACTTTACTTCTGAGCTATATGCTGGTTAT
CAAGCCTTACTGAAAAAGCCAGAATTACTCAATGTAGATTATGCATACGAGTTATTTGGTCAGGCACATCAAGAATTTAT
CCATTTATTTGACACTTTAGCTGCGGGTCAGCGCGTCATTCTGACTGAAGAAGTGCATAAAGTTTTGAATGAATTAATGG
CCTTCGTACAGCAAGATGTTGAATCGACTTCGACGACGGTAATTGAACTTGTTGCTGAGGCTATTGTTTCTGGAAATACT
TTACAACCAAGTCTTGATCTTGCACAGATTTCGCAGCAAATTGCATCGGATCATCAGTACAAGCAATCGAATACAGCCAA
TACCGATTTTGATGATGATTTGCTTGATATCTTCTTGGAAGAAGCTGAAGAATTATTGATGGGGATGGATCAGGATCTTA
ATACTTGGTCTAAAAATGGCAATGATACCGCGGCACTCAATAATTTAATGCGTTATTTGCACACCTTAAAAGGTGGTGCC
AATATGATTTCTGCACCTTTTATTGGTTCGATTGCACACGAATTAGAGTCTATTTATGAGCGTGTGATTCGTCAGCAAAT
AGCCACAACGCCACAGTTGATCAGCATCATTCGCTTAGTACAGGATGACGTCGCAGACCGAATTCAGGTCATTCGTACCG
ATAAGGTTGATTATCCAGCAACAGCGACGATCAATGTACTGCATAACATTCAGAGCTTAGTTGAGGGTACGACTGTTACA
ACTACAGTATCCGAGCCTTTAGTTGAAGCGTTTGTTGCGGCAGTTGAAGAACCTTTATCTAATATAGATAGAACGATTGA
AGCTGAGGCAGCTGCGGTTGAGTCAGCAACTGCGATTGAAGAGCCGAGTGTAGTTGATAACACTGACGTTACTGTCGTTG
AACAGCTGGATACTCCGTCACTTGTCCAAGAAGAAGCAGTCAGTGCTGTTGAAGAAGCAGCTAGTCTTTTATCAATTGTT
GAAGAAACCTTCTTGGAAGAAGCTGAAGAAATTTTAGCGACTACGGATGGCTTACTGAAACAGTGGACTGAACAACGTAG
TGATCGTAGTGTGTTACTACAATTGCAACGTGCTGCGCACAGCTTAAAAGGCGGCGCGCGTATGGCGGAGAATGAACCCG
TTGGTGCGATTGCTTATGAACTAGAAACCACATTTGAGCAATTTGCTGTACATAATTTCAGTTCAAACGTGTATGACCCA
TTATTGCAAACTGCATTTGAATGGTTAAAACAAGCCATTTTCAAACGTGATTTCAGTAATTATGATGGTTTGAAAAATAG
CTTAGCATCTATTGATTATGTGGATGTGATTGCGCAATTACCGACGCGTGTAACTCAAATTGATTTACTCAATGCGGTAC
CAAGTTTTGAGTTTGTGCAGGGTGATGGTACTGAGCCGCCAGCAATGCTGGGTGAGTGGAAAGAAACGACTCACTTGGAT
GGCGGTAATGAGATGATCCGTATCTCAGCTGATTTGGTTGAAAAAATGATCGACCTATCAGGTGAAAATGCAATTAACCG
TTCACGTATTGAAATGGATTTAGGTCAACTCGGCAATACGTTGAACGAGATGGAGCTTGCAATTAAGCGTTTGGCGGATC
AGTTACGTCGAATGGAAGGTGAGCTTGAGAGTCAAATTATTGCGAAACATGGTTCTGAAAACTCGCGCTATGCAGACTTT
GACCCCTTGGAGATGGACCAATATTCATCGCTCAATCAATTGTCCAAATCCTTAGCAGAATCGGCTTCGGATTTGGTCGA
CTTCAAGAGCACTTTGGCTGAAAAAATTCGTGATGCAGAAGGCTTGTTATTACAACAATCCCGTATTCAAGCGGAGATTC
AAGAAAGCTTAATGCGGACACGTTTGGTGCCGTTCTCACGTATGTTGCCGCGTTTACAACGTATTGTGCGTCAGACCGCC
TCAACCTTGAACCGTCCAACGGAATTGGTCGTTCATAACACTGAAGGTGAGTTAGACCGTACGATTCTTGAACGTTTGGT
AACACCATTTGAGCATATGCTACGTAACGCAATCGACCACGGTATTGAAGATACGGAACAACGTAGCGCTGCGAAAAAAT
CAGCGACAGGTCAAATTGAACTGAACATTAGTCGTCAAGGTACAGACGTTATCGTCAGTTTTAAAGATGATGGTAAGGGT
ATTGATGAAAGCACGATTAAAGCGAAAGCGCTAAATTTAGGTTTAATTAAAGCCGATCAAGTGCTAGATAAACAGGAAAT
CTTACAGTTTATTTTCCATCCGGGTTTCAGTACGGCCAAAGAAGTGACGCAAATTTCTGGACGTGGTGTCGGTCTTGATG
TGGTGCAAAGTGAAATTAAAGCACTGGGTGGACATGTCACGGTTGAATCGGAAATTGGACTGGGCACGACCTTCATTATT
CGTGTACCAACTACGGTAGCGGTGAGTGATGCCTTGATGGTAAAAGCCGGTGATCAACAATATGCGATTCCATTGGCGCA
GATTGATCGTATTGTGCGTATTGCTCCAACAGCACTGGATCACTATTTCCACAGCAAAGATGACCAATTCAAAATTGATG
GTGTGAGTTATAAACTGCGCTATTTATCTGAGTTTTTATCCAATCAGCCGATTCCACGTTTGAGTAATATTGGACATTCA
TTGCCGGTGTTGTTGATTAAAGGCAACAGTGGACAAACCATTGCATTATTGGTCGATCAGCTGATTGGTTCACGTGCGCA
AATTGTAGTGAAGCCAGTTGGACAACAGTTTGCCAGCATTGGTGCAATTGCGGGGGCAACGATCTTGGGTGATGGTCATG
TATGTTTGATTTTAGATGGTCAGAACATTGCACGTCAGATTTTAAGTACCAAGCGTGTAACGCATGCAGCTGATCATCGT
GACTTTGGTCGTCATCAGGATACGCGTCGTTTAGTGATGATTGTGGATGACTCGGTAACGGTTCGTAAGGTCACATCGCG
CTTATTAGAGCGCCAAGGCTTTGATATTGTGACAGCAAAAGACGGTGTCGATGCGATGGAGCAGCTTGAGAGTGTTAAAC
CAGACTTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTCGAAGTAACGAACTTGGTTCGTCACCACGAAATT
CACCAGAACTTGCCGATTATTATGATTACATCGCGTACGGGTGAAAAACACCGTGAACGTGCTTTCAGCTTGGGTGTGAC
ACACTACATGGGCAAACCGTTCCAAGAGGCAGAATTACTTGCCAACATTCAGCAGTTATTGGCTGAAAAGCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.726

100

0.617


Multiple sequence alignment