Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | HHJ45_RS19490 | Genome accession | NZ_CP053281 |
| Coordinates | 4045640..4046080 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360902.1 | Uniprot ID | A7ZHJ7 |
| Organism | Escherichia coli strain SCU-308 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4040640..4051080
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ45_RS19470 (HHJ45_19460) | aroP | 4041638..4043011 (+) | 1374 | WP_000969914.1 | aromatic amino acid transporter AroP | - |
| HHJ45_RS19475 (HHJ45_19465) | ampE | 4043054..4043908 (-) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| HHJ45_RS19480 (HHJ45_19470) | ampD | 4043905..4044456 (-) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| HHJ45_RS19485 (HHJ45_19475) | nadC | 4044544..4045437 (+) | 894 | WP_001135168.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| HHJ45_RS19490 (HHJ45_19480) | pilA | 4045640..4046080 (+) | 441 | WP_000360902.1 | prepilin peptidase-dependent pilin | Machinery gene |
| HHJ45_RS19495 (HHJ45_19485) | pilB | 4046090..4047475 (+) | 1386 | WP_001025155.1 | type II secretion system protein GspE | Machinery gene |
| HHJ45_RS19500 (HHJ45_19490) | hofC | 4047465..4048667 (+) | 1203 | WP_000157234.1 | protein transport protein HofC | - |
| HHJ45_RS19505 (HHJ45_19495) | guaC | 4048702..4049745 (-) | 1044 | WP_001217338.1 | GMP reductase | - |
| HHJ45_RS25295 | - | 4049901..4049945 (-) | 45 | WP_120795372.1 | protein YacM | - |
| HHJ45_RS19510 (HHJ45_19500) | coaE | 4049970..4050590 (+) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15630.76 Da Isoelectric Point: 4.5559
>NTDB_id=391390 HHJ45_RS19490 WP_000360902.1 4045640..4046080(+) (pilA) [Escherichia coli strain SCU-308]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALHQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALHQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=391390 HHJ45_RS19490 WP_000360902.1 4045640..4046080(+) (pilA) [Escherichia coli strain SCU-308]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCATC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCATC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
41.791 |
91.781 |
0.384 |
| pilA | Haemophilus influenzae Rd KW20 |
41.045 |
91.781 |
0.377 |