Detailed information NTG0391190

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: LG542_RS01000
• Genome accession: NZ_CP045007
• Coordinates: 211896..212582 (-)
• Length: 228 a.a.
• NCBI ID: WP_057908167.1
• Uniprot ID: A0AA89KXK4
• Organism: Latilactobacillus graminis strain LG542
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 206896..217582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG542_RS00995 (LG542_01000)	rpoC	207860..211504 (+)	3645	WP_057908168.1	DNA-directed RNA polymerase subunit beta'	-
LG542_RS01000 (LG542_01005)	comC	211896..212582 (-)	687	WP_057908167.1	A24 family peptidase	Machinery gene
LG542_RS01005 (LG542_01010)	rpsL	212865..213278 (+)	414	WP_004270179.1	30S ribosomal protein S12	-
LG542_RS01010 (LG542_01015)	rpsG	213368..213838 (+)	471	WP_057908166.1	30S ribosomal protein S7	-
LG542_RS01015 (LG542_01020)	fusA	213930..216017 (+)	2088	WP_057908165.1	elongation factor G	-

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 25817.88 Da
• Isoelectric Point: 7.6194

>NTDB_id=391190 LG542_RS01000 WP_057908167.1 211896..212582(-) (comC) [Latilactobacillus graminis strain LG542]
MLLYLTIFYAGACCASFLSVCAWRLPQGRSIVAPRSQCDNCHQQLAWFDLLPLISYLILQGKCRTCGKWINFYFWGSEFS
GGLLACFCWSHSWSLATIYLLVLLFEMSLVDLFHRILYPIPMLIAMAPLFYHYWSQNYWLSACLTGIIFCAFANWSAGFG
LGDAELISILTLWLGFEAILQVLLVACLSCLLLYGIRRTLSKPCNYQIPFIPYILAGVVMLLGHGICP

Nucleotide

• Length: 687 bp

>NTDB_id=391190 LG542_RS01000 WP_057908167.1 211896..212582(-) (comC) [Latilactobacillus graminis strain LG542]
ATGTTACTTTATTTAACCATCTTTTATGCTGGCGCTTGCTGTGCATCATTTTTGTCAGTTTGCGCATGGCGCTTGCCACA
AGGACGTTCCATTGTTGCACCGCGTTCGCAATGCGACAATTGTCATCAACAACTCGCCTGGTTTGATTTACTACCGCTGA
TTAGTTACCTAATCTTACAAGGTAAGTGCCGCACATGTGGTAAATGGATTAATTTTTATTTTTGGGGTAGCGAATTCAGC
GGCGGCTTATTAGCCTGCTTTTGTTGGAGCCATTCTTGGTCACTAGCAACAATCTATTTACTTGTGTTACTTTTTGAAAT
GAGTCTTGTCGATCTGTTCCACCGTATTCTCTATCCAATACCAATGCTGATTGCAATGGCGCCTCTTTTTTATCATTACT
GGTCACAAAATTACTGGTTAAGCGCCTGTTTAACAGGGATTATTTTCTGCGCCTTCGCTAATTGGTCGGCCGGCTTTGGT
TTAGGTGATGCAGAACTAATAAGCATTTTGACCCTTTGGTTGGGATTCGAGGCGATCCTACAAGTTTTGTTAGTTGCCTG
TTTAAGCTGCTTATTGTTATATGGCATTCGCCGAACCTTATCAAAACCTTGTAATTATCAGATTCCATTTATTCCATATA
TTTTAGCTGGTGTCGTCATGCTATTAGGCCACGGTATTTGTCCATAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (10-90)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Latilactobacillus sakei subsp. sakei 23K	58.333	100	0.583