Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | F7R60_RS08935 | Genome accession | NZ_CP044519 |
| Coordinates | 1864136..1864516 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836907.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 29FS20 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1859136..1869516
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7R60_RS08905 (F7R60_09040) | kdsB | 1860039..1860800 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| F7R60_RS08910 (F7R60_09045) | - | 1860812..1861792 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| F7R60_RS08915 (F7R60_09050) | - | 1861804..1862145 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| F7R60_RS08920 (F7R60_09055) | - | 1862163..1862936 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| F7R60_RS08925 (F7R60_09060) | - | 1862974..1863582 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| F7R60_RS08930 (F7R60_09065) | - | 1863592..1864146 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| F7R60_RS08935 (F7R60_09070) | xcpV | 1864136..1864516 (+) | 381 | WP_000836907.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| F7R60_RS08940 (F7R60_09075) | xcpW | 1864516..1865217 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| F7R60_RS08945 (F7R60_09080) | gspK | 1865217..1866176 (+) | 960 | WP_000301460.1 | type II secretion system minor pseudopilin GspK | - |
| F7R60_RS08950 (F7R60_09085) | - | 1866406..1867002 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| F7R60_RS08955 (F7R60_09090) | ung | 1867053..1867766 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| F7R60_RS08960 (F7R60_09095) | - | 1867763..1868887 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| F7R60_RS08965 (F7R60_09100) | tadA | 1868894..1869397 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13989.27 Da Isoelectric Point: 10.0060
>NTDB_id=390789 F7R60_RS08935 WP_000836907.1 1864136..1864516(+) (xcpV) [Acinetobacter baumannii strain 29FS20]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEIKQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEIKQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=390789 F7R60_RS08935 WP_000836907.1 1864136..1864516(+) (xcpV) [Acinetobacter baumannii strain 29FS20]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAAACAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAAACAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |