Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   F8M43_RS02185 Genome accession   NZ_CP044498
Coordinates   430579..431529 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain ms-2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 425579..436529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F8M43_RS02160 rapC 427039..428187 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  F8M43_RS02165 phrC 428171..428293 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  F8M43_RS02170 yczM 428393..428482 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  F8M43_RS02175 yczN 428564..428677 (-) 114 WP_032678937.1 YjcZ family sporulation protein -
  F8M43_RS02180 thrD 428830..430194 (-) 1365 WP_029726569.1 aspartate kinase -
  F8M43_RS02185 ceuB 430579..431529 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  F8M43_RS02190 yclO 431522..432469 (+) 948 WP_015252820.1 petrobactin ABC transporter permease YclO -
  F8M43_RS02195 yclP 432463..433221 (+) 759 WP_151433381.1 petrobactin ABC transporter ATP-binding protein YclP -
  F8M43_RS02200 yclQ 433243..434196 (+) 954 WP_015252818.1 petrobactin ABC transporter substrate-binding protein YclQ -
  F8M43_RS02205 cdaE 434243..435661 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=390533 F8M43_RS02185 WP_014475804.1 430579..431529(+) (ceuB) [Bacillus subtilis strain ms-2]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=390533 F8M43_RS02185 WP_014475804.1 430579..431529(+) (ceuB) [Bacillus subtilis strain ms-2]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment