Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | NLA_RS00115 | Genome accession | NC_014752 |
| Coordinates | 27234..28277 (-) | Length | 347 a.a. |
| NCBI ID | WP_003711230.1 | Uniprot ID | E4Z9S2 |
| Organism | Neisseria lactamica 020-06 | ||
| Function | pseudopilus biogenesis (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 22234..33277
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLA_RS00100 (NLA_0190) | - | 22422..22691 (+) | 270 | WP_013448172.1 | DUF3079 domain-containing protein | - |
| NLA_RS00105 (NLA_0200) | yccS | 23601..25751 (-) | 2151 | WP_013448173.1 | YccS family putative transporter | - |
| NLA_RS00110 (NLA_0210) | - | 25842..27068 (-) | 1227 | WP_003711227.1 | PilT/PilU family type 4a pilus ATPase | - |
| NLA_RS00115 (NLA_0220) | pilT | 27234..28277 (-) | 1044 | WP_003711230.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| NLA_RS00120 (NLA_0230) | - | 28391..29095 (+) | 705 | WP_013448174.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| NLA_RS00125 (NLA_0240) | - | 29083..29484 (+) | 402 | WP_003711233.1 | hypothetical protein | - |
| NLA_RS00130 (NLA_0250) | proC | 29515..30324 (+) | 810 | WP_258861361.1 | pyrroline-5-carboxylate reductase | - |
| NLA_RS00135 (NLA_0260) | dksA | 30471..30887 (+) | 417 | WP_003714191.1 | RNA polymerase-binding protein DksA | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38072.56 Da Isoelectric Point: 7.2981
>NTDB_id=39048 NLA_RS00115 WP_003711230.1 27234..28277(-) (pilT) [Neisseria lactamica 020-06]
MQITDLLAFGVKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNTGRGPAAVFRTIPSTVLSLEELKAPRIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTRDGNGRVASHEILISNPAVRNLIRENKITQINSVLQTGQASGMQTMDQS
LQSLVRQGLIAPEVARKRAQNSESMSF
MQITDLLAFGVKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNTGRGPAAVFRTIPSTVLSLEELKAPRIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTRDGNGRVASHEILISNPAVRNLIRENKITQINSVLQTGQASGMQTMDQS
LQSLVRQGLIAPEVARKRAQNSESMSF
Nucleotide
Download Length: 1044 bp
>NTDB_id=39048 NLA_RS00115 WP_003711230.1 27234..28277(-) (pilT) [Neisseria lactamica 020-06]
ATGCAGATTACCGACTTACTCGCCTTCGGCGTTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGATATGCGGCGCATCAACCTTCCTGAAATGAGCGCGGAAGAGGTCGGCAATATGGTAACTTCGG
TGATGAACGACCATCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGG
TTCCGCGTCAACGCCTTCAACACCGGCCGCGGCCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGAATTGAAAGCCCCGCGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGTATGGTTTTGGTTACCGGTCCTACCGGTT
CGGGCAAATCGACCACGCTTGCTGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAGCGCGAGCTGCACCAGCACACCCTCAGTTTCGCCAA
CGCGCTGAGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCTGAAACCATCGGGCTGG
CACTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCGGCAAAAACCGTCGACCGTATC
GTGGACGTATTCCCGGCGGGGGAAAAGGAAATGGTGCGCTCTATGCTGTCCGAATCACTGACCGCCGTCATCTCCCAAAA
CTTGCTGAAAACGCGCGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTTCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACACAAATCAACTCCGTCCTGCAAACCGGACAGGCGAGCGGTATGCAGACGATGGACCAGTCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGTCGCACGCAAACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
ATGCAGATTACCGACTTACTCGCCTTCGGCGTTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGATATGCGGCGCATCAACCTTCCTGAAATGAGCGCGGAAGAGGTCGGCAATATGGTAACTTCGG
TGATGAACGACCATCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGG
TTCCGCGTCAACGCCTTCAACACCGGCCGCGGCCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGAATTGAAAGCCCCGCGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGTATGGTTTTGGTTACCGGTCCTACCGGTT
CGGGCAAATCGACCACGCTTGCTGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAGCGCGAGCTGCACCAGCACACCCTCAGTTTCGCCAA
CGCGCTGAGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCTGAAACCATCGGGCTGG
CACTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCGGCAAAAACCGTCGACCGTATC
GTGGACGTATTCCCGGCGGGGGAAAAGGAAATGGTGCGCTCTATGCTGTCCGAATCACTGACCGCCGTCATCTCCCAAAA
CTTGCTGAAAACGCGCGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTTCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACACAAATCAACTCCGTCCTGCAAACCGGACAGGCGAGCGGTATGCAGACGATGGACCAGTCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGTCGCACGCAAACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Neisseria gonorrhoeae MS11 |
98.271 |
100 |
0.983 |
| pilT | Neisseria meningitidis 8013 |
97.983 |
100 |
0.98 |
| pilT | Acinetobacter nosocomialis M2 |
68.116 |
99.424 |
0.677 |
| pilT | Acinetobacter baumannii D1279779 |
68.116 |
99.424 |
0.677 |
| pilT | Acinetobacter baumannii strain A118 |
68.116 |
99.424 |
0.677 |
| pilT | Acinetobacter baylyi ADP1 |
67.536 |
99.424 |
0.671 |
| pilT | Pseudomonas stutzeri DSM 10701 |
66.667 |
99.424 |
0.663 |
| pilT | Pseudomonas aeruginosa PAK |
66.087 |
99.424 |
0.657 |
| pilT | Legionella pneumophila strain Lp02 |
64.809 |
98.271 |
0.637 |
| pilT | Legionella pneumophila strain ERS1305867 |
64.809 |
98.271 |
0.637 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
64.201 |
97.406 |
0.625 |
| pilT | Vibrio cholerae strain A1552 |
64.201 |
97.406 |
0.625 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.802 |
97.695 |
0.516 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.58 |
99.424 |
0.403 |
| pilU | Vibrio cholerae strain A1552 |
38.551 |
99.424 |
0.383 |
| pilU | Acinetobacter baylyi ADP1 |
38.15 |
99.712 |
0.38 |