Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FSA28_RS02070 Genome accession   NZ_CP044495
Coordinates   416661..417386 (+) Length   241 a.a.
NCBI ID   WP_002291641.1    Uniprot ID   -
Organism   Streptococcus mutans strain UA140     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 411661..422386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA28_RS02045 (FSA28_0192) - 412172..413602 (+) 1431 WP_002265163.1 NCS2 family permease -
  FSA28_RS02050 (FSA28_0193) tsaE 413730..414173 (+) 444 WP_002291643.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FSA28_RS02055 (FSA28_0194) brpA 414504..415724 (+) 1221 WP_002267779.1 biofilm formation/cell division transcriptional regulator BrpA -
  FSA28_RS02060 (FSA28_0195) - 415887..416180 (-) 294 WP_002265649.1 hypothetical protein -
  FSA28_RS02065 (FSA28_0196) - 416177..416596 (-) 420 WP_002291642.1 HIT family protein -
  FSA28_RS02070 (FSA28_0197) pptA 416661..417386 (+) 726 WP_002291641.1 ABC transporter ATP-binding protein Regulator
  FSA28_RS02075 (FSA28_0198) pptB 417389..418423 (+) 1035 WP_002291637.1 ABC transporter permease Regulator
  FSA28_RS02080 (FSA28_0199) ccrZ 418482..419264 (+) 783 WP_002262606.1 cell cycle regulator CcrZ -
  FSA28_RS02085 (FSA28_0200) trmB 419274..419909 (+) 636 WP_002265651.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FSA28_RS02095 (FSA28_0202) rimP 420181..420672 (+) 492 WP_002267543.1 ribosome maturation factor RimP -
  FSA28_RS02100 (FSA28_0203) nusA 420708..421901 (+) 1194 WP_002262603.1 transcription termination factor NusA -
  FSA28_RS02105 (FSA28_0204) - 421919..422215 (+) 297 WP_002263922.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26716.29 Da        Isoelectric Point: 4.9888

>NTDB_id=390421 FSA28_RS02070 WP_002291641.1 416661..417386(+) (pptA) [Streptococcus mutans strain UA140]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKTKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=390421 FSA28_RS02070 WP_002291641.1 416661..417386(+) (pptA) [Streptococcus mutans strain UA140]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAATATTCCTGTCTTGAAGAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATCGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACACCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCTTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGACTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.569

99.17

0.759
  pptA Streptococcus salivarius strain HSISS4

76.151

99.17

0.755

Multiple sequence alignment