Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FSA40_RS02010 Genome accession   NZ_CP044493
Coordinates   373345..374070 (+) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans strain MD     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 368345..379070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA40_RS01985 (FSA40_0392) - 368849..370279 (+) 1431 WP_002267778.1 NCS2 family permease -
  FSA40_RS01990 (FSA40_0393) tsaE 370407..370850 (+) 444 WP_002291643.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FSA40_RS01995 (FSA40_0394) brpA 371181..372401 (+) 1221 WP_002262611.1 biofilm formation/cell division transcriptional regulator BrpA -
  FSA40_RS02000 (FSA40_0395) - 372571..372864 (-) 294 WP_002268777.1 hypothetical protein -
  FSA40_RS02005 (FSA40_0396) - 372861..373280 (-) 420 WP_002262609.1 HIT family protein -
  FSA40_RS02010 (FSA40_0397) pptA 373345..374070 (+) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  FSA40_RS02015 (FSA40_0398) pptB 374073..375107 (+) 1035 WP_002268775.1 ABC transporter permease Regulator
  FSA40_RS02020 (FSA40_0399) ccrZ 375166..375948 (+) 783 WP_002265159.1 cell cycle regulator CcrZ -
  FSA40_RS02025 (FSA40_0400) trmB 375958..376593 (+) 636 WP_002265651.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FSA40_RS02035 (FSA40_0402) rimP 376865..377356 (+) 492 WP_002262604.1 ribosome maturation factor RimP -
  FSA40_RS02040 (FSA40_0403) nusA 377392..378585 (+) 1194 WP_002265156.1 transcription termination factor NusA -
  FSA40_RS02045 (FSA40_0404) - 378603..378899 (+) 297 WP_002263922.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=390351 FSA40_RS02010 WP_002262608.1 373345..374070(+) (pptA) [Streptococcus mutans strain MD]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=390351 FSA40_RS02010 WP_002262608.1 373345..374070(+) (pptA) [Streptococcus mutans strain MD]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACGCCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCCTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759

Multiple sequence alignment