Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   FSC12_RS11145 Genome accession   NZ_CP044474
Coordinates   2342800..2347299 (+) Length   1499 a.a.
NCBI ID   WP_163169304.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain HZE33-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2337800..2352299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSC12_RS11120 (FSC12_11215) - 2338221..2338880 (-) 660 WP_163169302.1 hypothetical protein -
  FSC12_RS11125 (FSC12_11220) pilG 2339189..2339572 (+) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  FSC12_RS11130 (FSC12_11225) - 2339603..2339971 (+) 369 WP_004814764.1 response regulator -
  FSC12_RS11135 (FSC12_11230) - 2339977..2340513 (+) 537 WP_004814765.1 chemotaxis protein CheW -
  FSC12_RS11140 (FSC12_11235) - 2340559..2342631 (+) 2073 WP_163169303.1 methyl-accepting chemotaxis protein -
  FSC12_RS11145 (FSC12_11240) chpA 2342800..2347299 (+) 4500 WP_163169304.1 Hpt domain-containing protein Regulator
  FSC12_RS11150 (FSC12_11245) - 2347303..2347764 (+) 462 WP_163169305.1 hypothetical protein -
  FSC12_RS11155 (FSC12_11250) dapE 2347838..2348974 (-) 1137 WP_163169306.1 succinyl-diaminopimelate desuccinylase -
  FSC12_RS11160 (FSC12_11255) - 2349099..2349248 (-) 150 WP_004814773.1 entericidin A/B family lipoprotein -
  FSC12_RS11165 (FSC12_11260) - 2349387..2350235 (-) 849 WP_163169307.1 DUF1853 family protein -
  FSC12_RS11170 (FSC12_11265) - 2350324..2350719 (+) 396 WP_008307518.1 YbaN family protein -
  FSC12_RS11175 (FSC12_11270) elsL 2350724..2351230 (+) 507 WP_163165246.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1499 a.a.        Molecular weight: 166859.53 Da        Isoelectric Point: 4.2408

>NTDB_id=390222 FSC12_RS11145 WP_163169304.1 2342800..2347299(+) (chpA) [Acinetobacter schindleri strain HZE33-1]
MKEILKDLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELNALLPQWFATPDHQETLTTIRRHFHTLKGSGRMVGAKQA
GEIAWAVEDTLNRVLSGSIKLTPVIQKFAQATLNIYQYVLYPCFKQVQPLTVDLRPVVLLGQQLQQHLSPEPALEELLLL
ADNLNAEGQLTGLELADAAEADSSGVEIAETTTAERVEVAEERTDLEETVAIFVEEAEEHLATIHDFLKHENSAKQDYNG
LIRALHTLRGSSSMAQIDDICEASVKVENLFKTLVQDEIASTSKETALLQQYSEFIGDYLHLLKQGNTEKLAGISATFED
AWDAYGFTVTEEQDADQSQGMVTRLVELNIDQLLDAEFEFDKRVLEEYPDYIEALSQQAAELMVHTDNRASIGIHEFASQ
LKAAYDALLARPVLLESDYAFELFAQAHQEFIHLFDTLAAGQRVILNAEVEKLLADLSAFVQQDIEVFATDKFVETAVPA
PVESDISTAVDFTGLSQRIAADRQQQDAEDANRDFDEDLLDIFLEEADELLAGIDEDLNTWSKEPENIHSLNNLMRYLHT
LKGGANMIAATHIGSIAHELESIYERVIRQQITVTPALIQIIRLVQDNVSDRIQSIRDDKIDYPAPEAIHMLQNIQALVA
GTATATPVAAVETVEAETSVELEVIDDASESAEIVAESQALERVDSFETESVPASDEQIQEDQSGETFTAESAESMLADE
DDLQSIVEETFLEESQEILENAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMISNESIASIAYGLESAFEQFAVHHF
NSNAYDSLLQKTLKWLGQAIFDHDYNGFEQIKAALDAIEFVDVTAQLPERLTKTESLEVTTGFEFVQGDGTEPPNMMGEW
AENTSSDSSNEMIRISAELVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSE
NSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQ
RIVRQTSTTLNRPAELIVQNTEGELDRTILERLVNPFEHMLRNAIDHGLEDTAERLALNKPEVGSIVLNISRQGTDVIIS
FSDDGKGIDAESIRAKAISLGLIKAEQQVDQEELLQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKTLGGHVSVNSELG
KGTTFTIRVPTTVAVSDALMVKAGDQQFAISLAQIDRIVRIAPATLETYFNSKDDYFKIDGVNYKLRYLSEFVSNQPIPR
LNNVAHSLPVLLIKGNGGQSIALLVDQLVGSRAQIVVKPIGQQFASVGVIAGATILGDGQVCLILDGQNIARQVQATQRI
KQLSDQQDLSRRGNARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTN
LVRHHDIHRNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANVQELIAAQQG

Nucleotide


Download         Length: 4500 bp        

>NTDB_id=390222 FSC12_RS11145 WP_163169304.1 2342800..2347299(+) (chpA) [Acinetobacter schindleri strain HZE33-1]
ATGAAAGAAATATTAAAAGATCTAGTTGAAACAACAGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCTGAAATTTT
AGAGATATTTGTCGAAGAGATTGAAGAAATCTTTGTCGAGTTAAATGCTTTATTGCCACAGTGGTTTGCCACACCAGATC
ATCAAGAAACATTAACCACCATTCGCCGCCATTTCCATACGCTGAAAGGTTCGGGTCGTATGGTCGGTGCGAAGCAGGCG
GGTGAAATTGCCTGGGCAGTTGAAGATACTTTGAACCGCGTACTTTCCGGTTCAATCAAATTAACGCCAGTCATTCAGAA
GTTCGCGCAAGCAACTTTAAATATCTATCAATATGTATTGTATCCATGCTTTAAGCAGGTACAGCCATTAACCGTGGATT
TACGTCCAGTCGTACTTTTAGGACAACAATTACAACAGCATTTGAGTCCAGAACCGGCACTTGAAGAATTATTGCTACTT
GCGGACAATCTGAATGCTGAAGGTCAGCTAACAGGTCTTGAACTTGCGGATGCTGCAGAAGCAGATTCATCAGGAGTAGA
GATTGCTGAAACTACTACCGCAGAACGAGTAGAAGTTGCTGAAGAACGTACTGACCTTGAAGAAACGGTGGCGATCTTTG
TTGAAGAAGCCGAGGAACATCTTGCGACAATCCATGATTTCCTAAAACATGAAAATAGTGCCAAGCAAGACTATAATGGC
CTGATTCGTGCATTGCATACCCTGCGTGGCAGCTCTTCTATGGCACAAATTGATGATATCTGTGAGGCCAGCGTTAAAGT
AGAGAATTTATTTAAAACGCTGGTTCAGGATGAAATTGCTTCAACTTCCAAAGAAACAGCACTATTACAGCAATATTCAG
AATTTATCGGTGATTATTTACATCTATTGAAACAAGGTAACACTGAAAAGCTGGCAGGGATTTCTGCTACTTTTGAGGAT
GCCTGGGATGCCTATGGCTTTACTGTGACTGAAGAGCAGGATGCTGATCAATCTCAAGGTATGGTTACACGTCTGGTTGA
ACTGAATATTGATCAGTTGCTGGATGCCGAATTTGAGTTTGATAAGCGGGTACTTGAAGAATATCCAGATTATATTGAAG
CTTTAAGCCAGCAAGCCGCAGAGCTGATGGTACATACGGATAACCGTGCATCGATCGGTATTCATGAATTCGCATCCCAG
TTAAAAGCAGCTTATGATGCTTTGCTGGCGAGACCGGTCTTGCTTGAAAGTGATTATGCCTTTGAACTTTTTGCACAGGC
ACACCAGGAATTTATTCACCTGTTCGATACGCTCGCGGCAGGACAGCGGGTGATTTTGAATGCCGAAGTTGAAAAACTTC
TGGCGGATCTGTCTGCCTTTGTACAGCAAGACATCGAAGTATTCGCTACAGACAAATTTGTTGAAACTGCGGTACCTGCG
CCAGTAGAGTCGGATATATCCACAGCGGTTGATTTTACTGGGCTCAGCCAGCGTATTGCAGCTGATCGTCAGCAGCAGGA
CGCTGAAGATGCCAACCGTGATTTCGATGAAGACTTGCTGGATATCTTCCTGGAAGAAGCAGATGAGTTGCTGGCAGGCA
TTGATGAAGACCTGAATACCTGGTCCAAAGAACCTGAAAATATTCATTCATTGAACAATCTGATGCGTTATTTGCATACC
CTGAAGGGGGGTGCAAACATGATTGCTGCCACGCATATCGGTTCGATTGCACATGAGCTGGAAAGTATTTATGAGCGCGT
GATCCGTCAGCAGATTACCGTAACACCTGCATTGATCCAAATTATCCGACTGGTACAGGATAACGTGTCAGACCGTATCC
AGAGTATTCGTGATGACAAGATCGATTATCCGGCACCTGAAGCTATTCATATGCTGCAAAATATCCAGGCACTTGTGGCT
GGAACAGCTACTGCAACTCCGGTAGCTGCTGTTGAGACGGTAGAAGCAGAGACTTCTGTAGAACTAGAAGTTATTGACGA
TGCATCGGAATCTGCTGAGATCGTTGCGGAATCACAAGCGCTTGAGCGAGTAGACAGCTTTGAAACTGAATCTGTTCCTG
CATCAGATGAGCAAATTCAGGAAGATCAATCAGGCGAAACATTTACGGCTGAGTCAGCTGAATCTATGCTCGCTGATGAA
GATGATCTGCAATCGATTGTCGAAGAAACCTTCCTGGAAGAATCGCAAGAGATTCTGGAAAATGCAGAAAAATTACTGAA
CCAATGGTTCGATCAGCGAAGTGACCGTAGCTTATTGCTGCAACTTCAGCGTGCTGCCCACAGTATTAAGGGTGGCGCCC
GCATGATCAGCAATGAAAGCATCGCAAGTATTGCTTATGGTCTGGAAAGTGCATTTGAACAGTTTGCTGTTCATCATTTT
AACTCCAATGCCTATGACAGTCTGCTGCAAAAGACCCTGAAATGGCTGGGTCAAGCCATTTTTGATCATGATTACAATGG
TTTTGAGCAAATCAAAGCAGCGCTGGATGCGATTGAGTTTGTAGATGTCACTGCACAGCTACCTGAACGTCTGACCAAAA
CTGAAAGTCTGGAAGTTACAACTGGCTTCGAGTTTGTTCAAGGTGATGGTACTGAACCACCAAATATGATGGGTGAGTGG
GCTGAGAACACCTCAAGCGATAGCAGTAACGAGATGATCCGTATTTCAGCCGAACTGGTCGAGAAGATGATTGACCTGTC
AGGTGAAAATGCAATTAACCGTTCGCGTATCGAGATGGATCTGGGACAGCTCGGCAATACCTTAAATGAGATGGAACTGG
CGATCAAACGCCTGGCTGATCAGCTGCGCCGTATGGAAGGCGAGCTGGAATCTCAGATTATTGCCAAACATGGCTCAGAA
AACTCACGCTATGCTGACTTCGATCCGTTGGAGATGGACCAATATTCATCCCTGAACCAGTTATCTAAATCTCTTGCTGA
ATCTGCATCGGACTTGGTCGACTTTAAGACCACGCTCGCGGAAAAAATCCGTGATACCGAAGGTTTGCTATTGCAACAGT
CGCGTATCCAGGCTGAGATTCAGGAAAGTCTGATGCGTACCCGTCTGGTACCATTTGACCGTATGTTGCCACGTTTACAA
CGTATTGTGCGTCAAACTTCGACTACACTGAACCGTCCGGCAGAGCTGATTGTTCAGAATACTGAAGGTGAACTCGACCG
TACCATTCTGGAACGTCTGGTAAACCCATTCGAGCACATGCTACGTAACGCGATTGACCATGGTCTGGAAGATACTGCAG
AACGGCTTGCGCTGAATAAGCCAGAAGTCGGTTCAATTGTCTTGAACATTAGCCGTCAGGGTACCGATGTCATTATCTCC
TTTAGTGATGATGGTAAGGGGATTGATGCGGAGAGTATTCGAGCTAAAGCCATCAGTCTGGGCTTGATCAAAGCGGAACA
GCAGGTAGATCAGGAAGAATTGCTCCAATTCATCTTCCATCCAGGTTTCAGTACGGCTAAAGCAGTCACCCAGATTTCTG
GTCGAGGTGTTGGTCTGGACGTGGTACAAAGCGAAATCAAAACGCTGGGCGGTCACGTTTCGGTAAATTCTGAACTAGGC
AAAGGCACGACCTTTACGATTCGCGTACCGACCACTGTGGCAGTCAGTGATGCCTTGATGGTGAAAGCGGGTGACCAGCA
ATTTGCCATTTCTCTGGCACAGATTGACCGTATTGTCCGTATTGCACCAGCAACACTGGAAACTTACTTCAACAGTAAGG
ATGATTACTTCAAGATTGATGGTGTGAACTACAAGCTGCGCTATCTGTCTGAGTTTGTCTCTAATCAGCCAATTCCACGT
TTGAATAATGTCGCACATTCATTACCAGTACTCCTCATCAAGGGTAATGGTGGTCAAAGTATCGCTTTGCTGGTGGATCA
ATTAGTTGGCTCACGTGCACAGATCGTAGTGAAACCGATTGGACAGCAGTTTGCCAGTGTGGGTGTGATTGCAGGGGCAA
CCATTCTTGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGGTTCAGGCGACACAGCGTATC
AAACAGTTATCTGATCAGCAGGATCTGTCGCGTCGTGGTAATGCACGTCGTCTGGTCATGATTGTCGATGACTCGGTAAC
TGTACGTAAGGTAACGTCACGTCTGTTAGAGCGTCAGGGTTATGATATTGTCACTGCCAAAGATGGTGTCGACGCGATTG
AACAGCTGGAAAATGTCCGTCCAGATCTGATGTTGCTGGATATTGAAATGCCACGTATGGACGGTTTCGAAGTAACTAAC
CTGGTTCGCCATCATGATATTCACCGCAACTTGCCAATTATCATGATCACCTCACGTACTGGGGAGAAGCATCGTGAGCG
TGCCTTCAGTCTGGGTGTGACACACTATATGGGTAAACCGTTCCAGGAAGCGGAGCTGCTTGCCAATGTTCAAGAATTAA
TTGCTGCTCAACAGGGGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1379-1490)

CheW-like domain (CheW)

(1218-1354)

Hpt domain (Hpt)

(209-283)

Hpt domain (Hpt)

(25-103)

Hpt domain (Hpt)

(518-604)

Hpt domain (Hpt)

(729-793)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1076-1211)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.719

100

0.62

Multiple sequence alignment