Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | FSC12_RS09080 | Genome accession | NZ_CP044474 |
| Coordinates | 1921044..1921685 (+) | Length | 213 a.a. |
| NCBI ID | WP_163169081.1 | Uniprot ID | A0AAE6WUF8 |
| Organism | Acinetobacter schindleri strain HZE33-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1916044..1926685
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FSC12_RS09065 (FSC12_09145) | - | 1916413..1917216 (+) | 804 | WP_163169079.1 | putative RNA methyltransferase | - |
| FSC12_RS09070 (FSC12_09150) | ponA | 1917288..1919816 (-) | 2529 | WP_163169080.1 | penicillin-binding protein PBP1a | - |
| FSC12_RS09075 (FSC12_09155) | pilM | 1919986..1921044 (+) | 1059 | WP_004810013.1 | pilus assembly protein PilM | Machinery gene |
| FSC12_RS09080 (FSC12_09160) | comN | 1921044..1921685 (+) | 642 | WP_163169081.1 | PilN domain-containing protein | Machinery gene |
| FSC12_RS09085 (FSC12_09165) | comO | 1921679..1922398 (+) | 720 | WP_026056744.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FSC12_RS09090 (FSC12_09170) | pilP | 1922398..1922925 (+) | 528 | WP_004810006.1 | pilus assembly protein PilP | Machinery gene |
| FSC12_RS09095 (FSC12_09175) | pilQ | 1922942..1925029 (+) | 2088 | WP_163169082.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| FSC12_RS09100 (FSC12_09180) | aroK | 1925066..1925602 (+) | 537 | WP_004810003.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 23837.07 Da Isoelectric Point: 4.8970
>NTDB_id=390213 FSC12_RS09080 WP_163169081.1 1921044..1921685(+) (comN) [Acinetobacter schindleri strain HZE33-1]
MAKINLLPWRDELRIKRNNEFVAYCVGALLLGMTAAGGSWFYYDQKLQDQEQANQLIISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSDMYITRFVRSGDKFTIEGKAASPNTVAELLRNLEASTWYRNAFMNAFLV
AEENKDKAPSSVIPRVEESYGTFTVTVDLDQIAQPVLSEQQPQATAATGGATS
MAKINLLPWRDELRIKRNNEFVAYCVGALLLGMTAAGGSWFYYDQKLQDQEQANQLIISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSDMYITRFVRSGDKFTIEGKAASPNTVAELLRNLEASTWYRNAFMNAFLV
AEENKDKAPSSVIPRVEESYGTFTVTVDLDQIAQPVLSEQQPQATAATGGATS
Nucleotide
Download Length: 642 bp
>NTDB_id=390213 FSC12_RS09080 WP_163169081.1 1921044..1921685(+) (comN) [Acinetobacter schindleri strain HZE33-1]
ATGGCAAAAATTAACTTACTTCCTTGGCGTGATGAGCTCAGGATAAAAAGAAATAACGAATTTGTCGCATATTGCGTCGG
GGCATTATTGCTAGGAATGACAGCAGCAGGGGGAAGCTGGTTCTACTATGATCAAAAGTTACAGGATCAAGAACAAGCCA
ACCAACTCATCATCAGTACCAATCAGAATCTGGATGTACAGCTAAAATCTCTGGAAGGTTTACAGGAACAGCGTAATGCG
ATTGTGGAACGCATGAAACTGATTCAAGGTTTACAAACTCAGCGTCCAATTGCCGTGCATCTTATTGACGAGATTGTACG
TGTAACCCCAAGTGATATGTATATCACCAGATTTGTTCGTAGTGGTGATAAGTTCACTATTGAAGGGAAAGCAGCAAGTC
CAAATACGGTTGCAGAATTATTGCGTAATCTCGAAGCTTCTACCTGGTACCGTAATGCTTTCATGAATGCATTCCTTGTG
GCAGAAGAGAACAAGGACAAGGCGCCAAGCTCTGTTATTCCACGTGTTGAAGAATCTTATGGCACATTTACAGTGACAGT
GGATCTGGACCAGATTGCTCAACCGGTGCTTTCAGAACAACAGCCGCAAGCGACTGCAGCAACAGGAGGGGCGACATCAT
GA
ATGGCAAAAATTAACTTACTTCCTTGGCGTGATGAGCTCAGGATAAAAAGAAATAACGAATTTGTCGCATATTGCGTCGG
GGCATTATTGCTAGGAATGACAGCAGCAGGGGGAAGCTGGTTCTACTATGATCAAAAGTTACAGGATCAAGAACAAGCCA
ACCAACTCATCATCAGTACCAATCAGAATCTGGATGTACAGCTAAAATCTCTGGAAGGTTTACAGGAACAGCGTAATGCG
ATTGTGGAACGCATGAAACTGATTCAAGGTTTACAAACTCAGCGTCCAATTGCCGTGCATCTTATTGACGAGATTGTACG
TGTAACCCCAAGTGATATGTATATCACCAGATTTGTTCGTAGTGGTGATAAGTTCACTATTGAAGGGAAAGCAGCAAGTC
CAAATACGGTTGCAGAATTATTGCGTAATCTCGAAGCTTCTACCTGGTACCGTAATGCTTTCATGAATGCATTCCTTGTG
GCAGAAGAGAACAAGGACAAGGCGCCAAGCTCTGTTATTCCACGTGTTGAAGAATCTTATGGCACATTTACAGTGACAGT
GGATCTGGACCAGATTGCTCAACCGGTGCTTTCAGAACAACAGCCGCAAGCGACTGCAGCAACAGGAGGGGCGACATCAT
GA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Acinetobacter baylyi ADP1 |
67.943 |
98.122 |
0.667 |
| pilN | Acinetobacter baumannii D1279779 |
66.351 |
99.061 |
0.657 |