Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FSC09_RS08095 | Genome accession | NZ_CP044455 |
| Coordinates | 1687351..1687695 (-) | Length | 114 a.a. |
| NCBI ID | WP_267313869.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain B18 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1682351..1692695
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FSC09_RS08065 (FSC09_08080) | tadA | 1682581..1683102 (-) | 522 | WP_127799402.1 | tRNA adenosine(34) deaminase TadA | - |
| FSC09_RS08070 (FSC09_08085) | - | 1683106..1684230 (-) | 1125 | WP_005177517.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FSC09_RS08075 (FSC09_08090) | ung | 1684227..1684940 (-) | 714 | WP_163145854.1 | uracil-DNA glycosylase | - |
| FSC09_RS08080 (FSC09_08095) | - | 1684982..1685578 (-) | 597 | WP_005177512.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| FSC09_RS08085 (FSC09_08100) | gspK | 1685726..1686673 (-) | 948 | WP_163145855.1 | type II secretion system minor pseudopilin GspK | - |
| FSC09_RS08090 (FSC09_08105) | xcpW | 1686719..1687354 (-) | 636 | WP_104472233.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FSC09_RS08095 (FSC09_08110) | xcpV | 1687351..1687695 (-) | 345 | WP_267313869.1 | type II secretion system protein GspI | Machinery gene |
| FSC09_RS08100 (FSC09_08115) | - | 1687835..1688407 (-) | 573 | WP_163145857.1 | type II secretion system protein | - |
| FSC09_RS08105 (FSC09_08120) | - | 1688413..1689027 (-) | 615 | WP_016658223.1 | TetR/AcrR family transcriptional regulator | - |
| FSC09_RS08110 (FSC09_08125) | - | 1689088..1689861 (-) | 774 | WP_005177502.1 | TatD family hydrolase | - |
| FSC09_RS08115 (FSC09_08130) | - | 1689891..1690232 (-) | 342 | WP_163145858.1 | PilZ domain-containing protein | - |
| FSC09_RS08120 (FSC09_08135) | - | 1690244..1691227 (-) | 984 | WP_075166783.1 | DNA polymerase III subunit delta' | - |
| FSC09_RS08125 (FSC09_08140) | kdsB | 1691236..1692000 (-) | 765 | WP_163145859.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12589.28 Da Isoelectric Point: 6.2041
>NTDB_id=390125 FSC09_RS08095 WP_267313869.1 1687351..1687695(-) (xcpV) [Acinetobacter indicus strain B18]
MVALAIFATAAMALTQVAMQYTQSTSHAILRTKAQFVALNEQALMEIQQDWLTGTQSKQVTQQGESWQIDKSAQATISPN
VQRVEVQVSLFNPDTGQVEAGITHLVFFNHRVAQ
MVALAIFATAAMALTQVAMQYTQSTSHAILRTKAQFVALNEQALMEIQQDWLTGTQSKQVTQQGESWQIDKSAQATISPN
VQRVEVQVSLFNPDTGQVEAGITHLVFFNHRVAQ
Nucleotide
Download Length: 345 bp
>NTDB_id=390125 FSC09_RS08095 WP_267313869.1 1687351..1687695(-) (xcpV) [Acinetobacter indicus strain B18]
ATGGTGGCACTGGCGATTTTCGCTACAGCTGCCATGGCACTGACCCAAGTGGCCATGCAATATACCCAGTCCACCTCTCA
TGCCATTTTAAGAACCAAAGCGCAGTTTGTGGCCTTAAACGAACAGGCTCTAATGGAAATCCAGCAGGACTGGCTGACGG
GTACGCAATCAAAACAGGTCACCCAGCAAGGTGAAAGCTGGCAAATTGATAAAAGTGCACAGGCCACCATTAGCCCGAAT
GTGCAGCGGGTAGAAGTGCAGGTCAGCTTATTTAACCCCGATACCGGCCAGGTGGAAGCCGGCATCACCCATTTGGTGTT
TTTTAATCATCGGGTGGCGCAATGA
ATGGTGGCACTGGCGATTTTCGCTACAGCTGCCATGGCACTGACCCAAGTGGCCATGCAATATACCCAGTCCACCTCTCA
TGCCATTTTAAGAACCAAAGCGCAGTTTGTGGCCTTAAACGAACAGGCTCTAATGGAAATCCAGCAGGACTGGCTGACGG
GTACGCAATCAAAACAGGTCACCCAGCAAGGTGAAAGCTGGCAAATTGATAAAAGTGCACAGGCCACCATTAGCCCGAAT
GTGCAGCGGGTAGAAGTGCAGGTCAGCTTATTTAACCCCGATACCGGCCAGGTGGAAGCCGGCATCACCCATTTGGTGTT
TTTTAATCATCGGGTGGCGCAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
76.786 |
98.246 |
0.754 |