Detailed information NTG0390100

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FSC05_RS13120
• Genome accession: NZ_CP044450
• Coordinates: 2747223..2748578 (+)
• Length: 451 a.a.
• NCBI ID: WP_267313605.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain MMS9-2
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2742223..2753578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSC05_RS13100 (FSC05_13170)	thrC	2742394..2743539 (+)	1146	WP_005181581.1	threonine synthase	-
FSC05_RS13105 (FSC05_13175)	-	2743633..2744715 (-)	1083	WP_127799456.1	serine hydrolase	-
FSC05_RS13110 (FSC05_13180)	-	2744933..2745568 (+)	636	WP_005181577.1	response regulator	-
FSC05_RS13115 (FSC05_13185)	pilS	2745583..2747151 (+)	1569	WP_104489117.1	sensor histidine kinase	Regulator
FSC05_RS13120 (FSC05_13190)	pilR	2747223..2748578 (+)	1356	WP_267313605.1	sigma-54-dependent transcriptional regulator	Regulator
FSC05_RS13125 (FSC05_13195)	-	2748595..2749764 (-)	1170	WP_005181572.1	S41 family peptidase	-
FSC05_RS13130 (FSC05_13200)	gpmI	2749788..2751335 (-)	1548	WP_005181570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
FSC05_RS13135 (FSC05_13205)	lptG	2751454..2752524 (-)	1071	WP_005181568.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50649.33 Da
• Isoelectric Point: 6.6716

>NTDB_id=390100 FSC05_RS13120 WP_267313605.1 2747223..2748578(+) (pilR) [Acinetobacter indicus strain MMS9-2]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAYSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRGVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPETDTATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=390100 FSC05_RS13120 WP_267313605.1 2747223..2748578(+) (pilR) [Acinetobacter indicus strain MMS9-2]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGGCAGTTGCTGTCCAG
TCATCACTATGATGCTTGCATCACCGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCATATAGTCAGGAAGCAGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTGCCAATTCAGCAACTACGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCGGGCACCGGGAAAGAAGTGGTGGCCAAT
CTGGTGCATCGCCTCAGTAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGCGCGATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGCCTGATCCAGTCAGCACACG
GCGGTAGCCTGTTCCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTGAAACTGCTGCGCGGGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATCAGCGCCAGCCATCAGGACCTGGAAGC
ATTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGCTGCCGCCACTGCGTG
AGCGCGGTCAAGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCGGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTGCGCAATATCATCGAACG
TGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCGCATCTGCAGACCGCACCGTTACGCAAGATGGCGCCACTGG
CCGAGCCAGAAACCGACACTGCAACACCGGTTACAGCCGATGCCCTGCCCGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCGCTGAATCTGACCCATTGGAACCGGACTTTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTAAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

• Response regulator receiver domain (Response_reg) (3-97)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.614	100	0.736
pilR	Pseudomonas aeruginosa PAK	50.111	99.557	0.499