Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   F4U91_RS04110 Genome accession   NZ_CP044354
Coordinates   810482..811753 (+) Length   423 a.a.
NCBI ID   WP_035436539.1    Uniprot ID   -
Organism   Limosilactobacillus fermentum strain 2760     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 805482..816753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F4U91_RS04080 (F4U91_04080) rpsB 805641..806420 (+) 780 WP_003681957.1 30S ribosomal protein S2 -
  F4U91_RS04085 (F4U91_04085) tsf 806511..807389 (+) 879 WP_003681955.1 translation elongation factor Ts -
  F4U91_RS04090 (F4U91_04090) pyrH 807470..808195 (+) 726 WP_151130268.1 UMP kinase -
  F4U91_RS04095 (F4U91_04095) frr 808195..808755 (+) 561 WP_003681953.1 ribosome recycling factor -
  F4U91_RS04100 (F4U91_04100) - 808882..809655 (+) 774 WP_003681952.1 isoprenyl transferase -
  F4U91_RS04105 (F4U91_04105) - 809672..810460 (+) 789 WP_003681950.1 phosphatidate cytidylyltransferase -
  F4U91_RS04110 (F4U91_04110) eeP 810482..811753 (+) 1272 WP_035436539.1 RIP metalloprotease RseP Regulator
  F4U91_RS04115 (F4U91_04115) - 811787..813508 (+) 1722 WP_015638806.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 46186.64 Da        Isoelectric Point: 6.8575

>NTDB_id=389627 F4U91_RS04110 WP_035436539.1 810482..811753(+) (eeP) [Limosilactobacillus fermentum strain 2760]
MIITIITFIIVFGILVLVHEFGHYYFAKRAGILVREFSIGMGPKVWWRRSNGTTYTIRILPLGGYVRLAGADEDEDELRP
GTPVTLQTNEEGKVTLINASEKETLLEGIPLRIVDSDLEDKLIISGYENDDEETVKTYPVDHDATIVERDGTEVRIAPKD
VQFQSASLPARMMTNFAGPMNNFILSLLVFIILGFTLSGIPTNSNVLGGVTKDSVAAKAGLVSGDKITRVATTKVSTWND
ISQAISPNPGKKLAVTYQRDGKTYHTTVTPKATKQGSQTVGMIGIREEEKFDPVARINYGWRQFITAGTLIFAVLGHMIT
HGFSLNDLGGPVAIYAGTSQATSLGINGILAFLAMLSINLGIVNLIPIPALDGGKLLLNIVEGIIRRPIPKKVEGILNLA
GFALLMILMVLVTYNDIQRYFIH

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=389627 F4U91_RS04110 WP_035436539.1 810482..811753(+) (eeP) [Limosilactobacillus fermentum strain 2760]
TTGATCATCACCATCATTACTTTTATCATTGTCTTCGGAATCCTGGTGCTCGTTCACGAATTCGGCCACTACTACTTTGC
CAAGCGGGCCGGGATTTTAGTACGCGAGTTTTCGATTGGGATGGGGCCCAAGGTTTGGTGGCGGCGTTCAAACGGGACGA
CCTACACCATCCGGATCCTGCCGCTTGGGGGCTACGTCCGCCTGGCCGGGGCCGATGAAGATGAAGACGAACTCCGTCCC
GGGACGCCGGTGACCTTGCAAACCAATGAGGAAGGCAAGGTGACCCTGATCAACGCCAGCGAAAAGGAAACCCTGTTGGA
GGGGATTCCGCTGCGGATCGTTGACAGCGACCTGGAGGATAAGTTAATCATCTCCGGGTACGAAAATGATGATGAAGAAA
CCGTCAAGACCTACCCGGTTGATCACGACGCGACGATCGTCGAACGGGACGGGACCGAGGTGCGGATCGCCCCCAAGGAC
GTTCAGTTCCAATCGGCCAGCTTACCGGCACGGATGATGACCAACTTTGCCGGGCCAATGAACAACTTCATCTTGTCCCT
GCTGGTCTTCATCATCCTGGGCTTTACCCTGAGCGGGATCCCCACCAACTCCAACGTTTTGGGCGGGGTGACCAAGGATT
CGGTGGCTGCCAAGGCCGGCCTGGTGAGCGGCGATAAAATTACCAGGGTGGCGACGACCAAGGTCAGCACCTGGAACGAT
ATTTCCCAGGCAATTTCCCCTAACCCGGGGAAGAAGCTCGCCGTTACCTACCAGCGCGATGGCAAGACCTACCACACCAC
CGTGACGCCTAAGGCCACCAAACAGGGGAGCCAAACGGTCGGGATGATCGGGATCAGAGAAGAGGAGAAGTTTGATCCGG
TCGCCCGCATTAACTACGGCTGGCGCCAATTTATCACCGCCGGCACCCTGATCTTTGCGGTGCTCGGCCACATGATTACG
CACGGCTTTAGCTTAAACGACCTGGGGGGGCCGGTGGCAATTTACGCCGGCACCTCGCAGGCCACCTCGTTAGGGATTAA
CGGCATCCTCGCCTTCTTGGCGATGCTGTCGATTAACCTAGGGATCGTTAACCTGATTCCGATCCCGGCCTTAGACGGGG
GGAAGCTCCTCTTAAACATTGTCGAAGGCATCATTCGCCGGCCAATTCCCAAAAAAGTGGAGGGGATTTTGAATTTGGCT
GGCTTTGCCCTCTTGATGATCCTGATGGTCCTTGTGACCTATAACGACATTCAACGCTACTTTATCCATTAA

Domains


Predicted by InterproScan.

(7-408)

(209-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.113

100

0.482

  eeP Streptococcus thermophilus LMD-9

48.113

100

0.482


Multiple sequence alignment