Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   F5989_RS06470 Genome accession   NZ_CP044221
Coordinates   1304541..1305311 (-) Length   256 a.a.
NCBI ID   WP_002267292.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCH105     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1299541..1310311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F5989_RS06450 (F5989_06570) ychF 1299957..1301072 (-) 1116 WP_002267294.1 redox-regulated ATPase YchF -
  F5989_RS06455 (F5989_06575) - 1301236..1301427 (-) 192 WP_002264634.1 DUF951 domain-containing protein -
  F5989_RS06460 (F5989_06580) dnaN 1301689..1302825 (-) 1137 WP_002267293.1 DNA polymerase III subunit beta -
  F5989_RS06465 (F5989_06585) dnaA 1302981..1304339 (-) 1359 WP_002262648.1 chromosomal replication initiator protein DnaA -
  F5989_RS06470 (F5989_06590) spo0J 1304541..1305311 (-) 771 WP_002267292.1 ParB/RepB/Spo0J family partition protein Regulator
  F5989_RS06475 (F5989_06595) htrA 1305791..1306999 (-) 1209 WP_002262650.1 S1C family serine protease Regulator
  F5989_RS06480 (F5989_06600) rlmH 1307205..1307684 (+) 480 WP_002267291.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  F5989_RS06485 (F5989_06605) - 1308028..1308690 (+) 663 WP_002262652.1 YoaK family protein -

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 29507.13 Da        Isoelectric Point: 10.0178

>NTDB_id=388842 F5989_RS06470 WP_002267292.1 1304541..1305311(-) (spo0J) [Streptococcus mutans strain NCH105]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSIEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKEPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 771 bp        

>NTDB_id=388842 F5989_RS06470 WP_002267292.1 1304541..1305311(-) (spo0J) [Streptococcus mutans strain NCH105]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTACACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTATAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAGAACCTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCCTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-196)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.219

100

0.992

Multiple sequence alignment