Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | F4V23_RS01880 | Genome accession | NZ_CP044175 |
| Coordinates | 376083..376388 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain AR-0411 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 371083..381388
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V23_RS01845 | - | 371498..372259 (+) | 762 | WP_025443303.1 | ATP-binding protein | - |
| F4V23_RS01850 | - | 372256..372939 (+) | 684 | WP_057032302.1 | 3-methyladenine DNA glycosylase | - |
| F4V23_RS01855 | thiD | 372939..373751 (+) | 813 | WP_002786353.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| F4V23_RS01860 | thiE | 373741..374373 (+) | 633 | WP_002777120.1 | thiamine phosphate synthase | - |
| F4V23_RS01865 | - | 374351..374980 (+) | 630 | WP_002783358.1 | uroporphyrinogen-III synthase | - |
| F4V23_RS01870 | - | 374973..375425 (-) | 453 | WP_151061260.1 | hypothetical protein | - |
| F4V23_RS01875 | - | 375422..376090 (-) | 669 | WP_002790524.1 | hypothetical protein | - |
| F4V23_RS01880 | ctsT | 376083..376388 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| F4V23_RS01885 | proC | 376385..377122 (-) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| F4V23_RS01890 | fliW | 377122..377511 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| F4V23_RS01895 | - | 377676..378323 (+) | 648 | WP_002780248.1 | outer membrane protein assembly factor BamD | - |
| F4V23_RS01900 | lon | 378339..380714 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| F4V23_RS01905 | rpsR | 380771..381031 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=388543 F4V23_RS01880 WP_002777852.1 376083..376388(-) (ctsT) [Campylobacter coli strain AR-0411]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=388543 F4V23_RS01880 WP_002777852.1 376083..376388(-) (ctsT) [Campylobacter coli strain AR-0411]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |