Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   NMBM01240149_RS10115 Genome accession   NC_017514
Coordinates   1963361..1964056 (-) Length   231 a.a.
NCBI ID   WP_002248140.1    Uniprot ID   -
Organism   Neisseria meningitidis M01-240149     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1958361..1969056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBM01240149_RS10100 (NMBM01240149_1788) - 1959551..1960357 (-) 807 WP_002215708.1 cytochrome C assembly family protein -
  NMBM01240149_RS10105 (NMBM01240149_1789) ffh 1960577..1961947 (+) 1371 WP_014581243.1 signal recognition particle protein -
  NMBM01240149_RS10110 (NMBM01240149_1790) - 1962319..1963284 (+) 966 WP_014580882.1 IS30-like element IS1655 family transposase -
  NMBM01240149_RS10115 (NMBM01240149_1791) dsbA2 1963361..1964056 (-) 696 WP_002248140.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMBM01240149_RS10120 (NMBM01240149_1792) - 1964227..1964886 (-) 660 WP_002218694.1 NYN domain-containing protein -
  NMBM01240149_RS10125 (NMBM01240149_1793) - 1965084..1967195 (-) 2112 Protein_1881 TonB-dependent receptor -
  NMBM01240149_RS10130 (NMBM01240149_1794) - 1967381..1967986 (-) 606 WP_014581244.1 nitroreductase family protein -
  NMBM01240149_RS10135 (NMBM01240149_1795) - 1968036..1968434 (-) 399 WP_002241055.1 DoxX family protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25378.89 Da        Isoelectric Point: 5.3625

>NTDB_id=38853 NMBM01240149_RS10115 WP_002248140.1 1963361..1964056(-) (dsbA2) [Neisseria meningitidis M01-240149]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAPLTEGVNYTVLSTPIPQQQAGKVEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEASESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=38853 NMBM01240149_RS10115 WP_002248140.1 1963361..1964056(-) (dsbA2) [Neisseria meningitidis M01-240149]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCAGCCCCATTGACCGAAGGCGTGAACTACACTGTAT
TGTCCACGCCTATCCCGCAACAGCAGGCCGGCAAAGTCGAAGTCTTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTTCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATCGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains

Predicted by InterProScan.

Thioredoxin (Thioredoxin_4)

(64-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

97.835

100

0.978
  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714