Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | F4V27_RS00320 | Genome accession | NZ_CP044167 |
| Coordinates | 64642..64944 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain AR-0415 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 59642..69944
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V27_RS00295 | rpsR | 60005..60265 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| F4V27_RS00300 | lon | 60325..62700 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| F4V27_RS00305 | - | 62717..63364 (-) | 648 | WP_002936691.1 | outer membrane protein assembly factor BamD | - |
| F4V27_RS00310 | fliW | 63525..63914 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| F4V27_RS00315 | proC | 63914..64645 (+) | 732 | WP_052777969.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| F4V27_RS00320 | ctsT | 64642..64944 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| F4V27_RS00325 | - | 64941..65603 (+) | 663 | WP_057100537.1 | hypothetical protein | - |
| F4V27_RS00330 | - | 65600..66052 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| F4V27_RS00335 | hemD | 66049..66678 (-) | 630 | WP_052833981.1 | uroporphyrinogen-III synthase | - |
| F4V27_RS00340 | thiE | 66656..67288 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| F4V27_RS00345 | thiD | 67278..68090 (-) | 813 | WP_002894307.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| F4V27_RS00350 | - | 68087..68773 (-) | 687 | WP_002894310.1 | endonuclease III domain-containing protein | - |
| F4V27_RS00355 | - | 68770..69531 (-) | 762 | WP_057100536.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=388457 F4V27_RS00320 WP_002855822.1 64642..64944(+) (ctsT) [Campylobacter jejuni strain AR-0415]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=388457 F4V27_RS00320 WP_002855822.1 64642..64944(+) (ctsT) [Campylobacter jejuni strain AR-0415]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCCATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCCATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |