Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | F4V31_RS08165 | Genome accession | NZ_CP044162 |
| Coordinates | 1564157..1564459 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain AR-0419 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1559157..1569459
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V31_RS08140 | rpsR | 1559519..1559779 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| F4V31_RS08145 | lon | 1559840..1562215 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| F4V31_RS08150 | - | 1562232..1562879 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| F4V31_RS08155 | fliW | 1563040..1563429 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| F4V31_RS08160 | proC | 1563429..1564160 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| F4V31_RS08165 | ctsT | 1564157..1564459 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| F4V31_RS08170 | - | 1564456..1565118 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| F4V31_RS08175 | - | 1565115..1565567 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| F4V31_RS08180 | hemD | 1565564..1566193 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| F4V31_RS08185 | thiE | 1566171..1566803 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| F4V31_RS08190 | thiD | 1566793..1567605 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| F4V31_RS08195 | - | 1567602..1568288 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| F4V31_RS08200 | - | 1568285..1569046 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=388450 F4V31_RS08165 WP_002853046.1 1564157..1564459(+) (ctsT) [Campylobacter jejuni strain AR-0419]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=388450 F4V31_RS08165 WP_002853046.1 1564157..1564459(+) (ctsT) [Campylobacter jejuni strain AR-0419]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |