Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | F4V32_RS00720 | Genome accession | NZ_CP044161 |
| Coordinates | 139588..139893 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain AR-0420 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 134588..144893
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V32_RS00685 | - | 135003..135764 (+) | 762 | WP_072212081.1 | ATP-binding protein | - |
| F4V32_RS00690 | - | 135761..136444 (+) | 684 | WP_150966194.1 | 3-methyladenine DNA glycosylase | - |
| F4V32_RS00695 | thiD | 136444..137256 (+) | 813 | WP_002786353.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| F4V32_RS00700 | thiE | 137246..137878 (+) | 633 | WP_002777120.1 | thiamine phosphate synthase | - |
| F4V32_RS00705 | - | 137856..138485 (+) | 630 | WP_002777119.1 | uroporphyrinogen-III synthase | - |
| F4V32_RS00710 | - | 138478..138930 (-) | 453 | WP_150966196.1 | hypothetical protein | - |
| F4V32_RS00715 | - | 138927..139595 (-) | 669 | WP_052780494.1 | hypothetical protein | - |
| F4V32_RS00720 | ctsT | 139588..139893 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| F4V32_RS00725 | proC | 139890..140627 (-) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| F4V32_RS00730 | fliW | 140627..141016 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| F4V32_RS00735 | - | 141180..141827 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| F4V32_RS00740 | lon | 141843..144218 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| F4V32_RS00745 | rpsR | 144274..144534 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=388406 F4V32_RS00720 WP_002777852.1 139588..139893(-) (ctsT) [Campylobacter coli strain AR-0420]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=388406 F4V32_RS00720 WP_002777852.1 139588..139893(-) (ctsT) [Campylobacter coli strain AR-0420]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTACAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTACAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |