Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   HIN89_RS01090 Genome accession   NZ_CP051862
Coordinates   223627..224262 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain Ab-C102     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 218627..229262
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HIN89_RS01075 (HIN89_01075) - 219414..220598 (+) 1185 WP_000939106.1 S41 family peptidase -
  HIN89_RS01080 (HIN89_01080) - 220602..222023 (-) 1422 WP_000840558.1 sigma-54-dependent transcriptional regulator -
  HIN89_RS01085 (HIN89_01085) pilS 222048..223616 (-) 1569 WP_001160328.1 sensor histidine kinase Regulator
  HIN89_RS01090 (HIN89_01090) letA 223627..224262 (-) 636 WP_000633799.1 response regulator Regulator
  HIN89_RS01095 (HIN89_01095) pbpG 224475..225521 (+) 1047 WP_031946417.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  HIN89_RS01100 (HIN89_01100) thrC 225628..226767 (-) 1140 WP_000063592.1 threonine synthase -
  HIN89_RS01105 (HIN89_01105) - 226823..228124 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  HIN89_RS01110 (HIN89_01110) - 228369..229184 (-) 816 WP_000011163.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=388382 HIN89_RS01090 WP_000633799.1 223627..224262(-) (letA) [Acinetobacter baumannii strain Ab-C102]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=388382 HIN89_RS01090 WP_000633799.1 223627..224262(-) (letA) [Acinetobacter baumannii strain Ab-C102]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCCGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55