Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   F3129_RS02000 Genome accession   NZ_CP044133
Coordinates   396061..397014 (+) Length   317 a.a.
NCBI ID   WP_059366593.1    Uniprot ID   -
Organism   Bacillus velezensis strain FJAT-46737     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 391061..402014
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F3129_RS01975 (F3129_01975) - 391107..392540 (+) 1434 WP_165913860.1 HAMP domain-containing sensor histidine kinase -
  F3129_RS01980 (F3129_01980) rapC 392693..393841 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  F3129_RS01985 (F3129_01985) phrC 393825..393944 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  F3129_RS01990 (F3129_01990) - 394093..394203 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  F3129_RS01995 (F3129_01995) - 394283..395647 (-) 1365 WP_020955323.1 aspartate kinase -
  F3129_RS02000 (F3129_02000) ceuB 396061..397014 (+) 954 WP_059366593.1 ABC transporter permease Machinery gene
  F3129_RS02005 (F3129_02005) - 397004..397951 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  F3129_RS02010 (F3129_02010) - 397945..398703 (+) 759 WP_043021401.1 ABC transporter ATP-binding protein -
  F3129_RS02015 (F3129_02015) - 398725..399669 (+) 945 WP_025284230.1 siderophore ABC transporter substrate-binding protein -
  F3129_RS02020 (F3129_02020) - 399711..401135 (-) 1425 WP_025284231.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=388145 F3129_RS02000 WP_059366593.1 396061..397014(+) (ceuB) [Bacillus velezensis strain FJAT-46737]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=388145 F3129_RS02000 WP_059366593.1 396061..397014(+) (ceuB) [Bacillus velezensis strain FJAT-46737]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATTCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATAGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment