Detailed information NTG0388143

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: F3129_RS01980
• Genome accession: NZ_CP044133
• Coordinates: 392693..393841 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain FJAT-46737
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 387693..398841

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F3129_RS01960 (F3129_01960)	-	388090..388773 (-)	684	WP_150940986.1	ABC transporter ATP-binding protein	-
F3129_RS01965 (F3129_01965)	-	388788..390224 (-)	1437	WP_150940987.1	ABC transporter permease	-
F3129_RS01970 (F3129_01970)	-	390437..391120 (+)	684	WP_007410267.1	response regulator transcription factor	-
F3129_RS01975 (F3129_01975)	-	391107..392540 (+)	1434	WP_165913860.1	HAMP domain-containing sensor histidine kinase	-
F3129_RS01980 (F3129_01980)	rapC	392693..393841 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
F3129_RS01985 (F3129_01985)	phrC	393825..393944 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
F3129_RS01990 (F3129_01990)	-	394093..394203 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
F3129_RS01995 (F3129_01995)	-	394283..395647 (-)	1365	WP_020955323.1	aspartate kinase	-
F3129_RS02000 (F3129_02000)	ceuB	396061..397014 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
F3129_RS02005 (F3129_02005)	-	397004..397951 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
F3129_RS02010 (F3129_02010)	-	397945..398703 (+)	759	WP_043021401.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=388143 F3129_RS01980 WP_007410270.1 392693..393841(+) (rapC) [Bacillus velezensis strain FJAT-46737]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=388143 F3129_RS01980 WP_007410270.1 392693..393841(+) (rapC) [Bacillus velezensis strain FJAT-46737]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCATCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568