Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   F3129_RS01780 Genome accession   NZ_CP044133
Coordinates   331494..331892 (-) Length   132 a.a.
NCBI ID   WP_014416873.1    Uniprot ID   I2C179
Organism   Bacillus velezensis strain FJAT-46737     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 326494..336892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F3129_RS01755 (F3129_01755) - 326665..327867 (+) 1203 WP_025284206.1 GTP-binding protein -
  F3129_RS01760 (F3129_01760) - 327932..329068 (+) 1137 WP_072588780.1 zinc-dependent alcohol dehydrogenase -
  F3129_RS01765 (F3129_01765) - 329083..329517 (+) 435 WP_007409358.1 RDD family protein -
  F3129_RS01770 (F3129_01770) - 329635..329913 (+) 279 WP_263612330.1 YckD family protein -
  F3129_RS01775 (F3129_01775) - 330017..331453 (+) 1437 WP_076425807.1 glycoside hydrolase family 1 protein -
  F3129_RS01780 (F3129_01780) nin/comJ 331494..331892 (-) 399 WP_014416873.1 competence protein ComJ Regulator
  F3129_RS01785 (F3129_01785) nucA/comI 331913..332350 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  F3129_RS01790 (F3129_01790) hxlB 332708..333265 (-) 558 WP_150940979.1 6-phospho-3-hexuloisomerase -
  F3129_RS01795 (F3129_01795) hxlA 333262..333897 (-) 636 WP_025284209.1 3-hexulose-6-phosphate synthase -
  F3129_RS01800 (F3129_01800) - 334129..334491 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14893.89 Da        Isoelectric Point: 4.7846

>NTDB_id=388141 F3129_RS01780 WP_014416873.1 331494..331892(-) (nin/comJ) [Bacillus velezensis strain FJAT-46737]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=388141 F3129_RS01780 WP_014416873.1 331494..331892(-) (nin/comJ) [Bacillus velezensis strain FJAT-46737]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C179

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765

Multiple sequence alignment