Detailed information NTG0388082

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: F5K02_RS06095
• Genome accession: NZ_CP044132
• Coordinates: 1196299..1197252 (+)
• Length: 317 a.a.
• NCBI ID: WP_007409125.1
• Uniprot ID: A7Z3B8
• Organism: Bacillus amyloliquefaciens strain ZKY01
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1191299..1202252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F5K02_RS06070 (F5K02_06115)	argF	1193117..1194088 (+)	972	WP_094032932.1	ornithine carbamoyltransferase	-
F5K02_RS06075 (F5K02_06120)	-	1194164..1194343 (+)	180	WP_003155070.1	YjzC family protein	-
F5K02_RS06080 (F5K02_06125)	-	1194380..1194565 (-)	186	WP_003155069.1	YjzD family protein	-
F5K02_RS06085 (F5K02_06135)	-	1194826..1195560 (+)	735	WP_094032933.1	hypothetical protein	-
F5K02_RS06090 (F5K02_06140)	-	1195643..1196209 (+)	567	WP_015417204.1	NAD(P) binding enzyme	-
F5K02_RS06095 (F5K02_06145)	med	1196299..1197252 (+)	954	WP_007409125.1	BMP family ABC transporter substrate-binding protein	Regulator
F5K02_RS06100 (F5K02_06150)	comZ	1197265..1197456 (+)	192	WP_003155061.1	ComZ family protein	Regulator
F5K02_RS06105 (F5K02_06155)	-	1197485..1197703 (-)	219	WP_007409123.1	hypothetical protein	-
F5K02_RS06110 (F5K02_06160)	-	1197870..1198808 (+)	939	WP_241458120.1	beta-ketoacyl-ACP synthase III	-
F5K02_RS06115 (F5K02_06165)	fabF	1198831..1200069 (+)	1239	WP_015417206.1	beta-ketoacyl-ACP synthase II	-
F5K02_RS06120 (F5K02_06170)	-	1200153..1200938 (+)	786	WP_032866148.1	DUF2268 domain-containing protein	-
F5K02_RS06125 (F5K02_06175)	-	1201112..1202098 (+)	987	WP_007409119.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.99 Da
• Isoelectric Point: 4.6686

>NTDB_id=388082 F5K02_RS06095 WP_007409125.1 1196299..1197252(+) (med) [Bacillus amyloliquefaciens strain ZKY01]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=388082 F5K02_RS06095 WP_007409125.1 1196299..1197252(+) (med) [Bacillus amyloliquefaciens strain ZKY01]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAACCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A7Z3B8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785