Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FOB62_RS05300 Genome accession   NZ_CP044102
Coordinates   1047108..1047884 (-) Length   258 a.a.
NCBI ID   WP_003054458.1    Uniprot ID   A0A9X5R320
Organism   Streptococcus dysgalactiae strain FDAARGOS_654     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1042108..1052884
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB62_RS05275 (FOB62_05275) ychF 1042220..1043335 (-) 1116 WP_014611901.1 redox-regulated ATPase YchF -
  FOB62_RS05280 (FOB62_05280) - 1043459..1043833 (-) 375 WP_003054451.1 helix-turn-helix transcriptional regulator -
  FOB62_RS05285 (FOB62_05285) - 1043958..1044155 (-) 198 WP_003054469.1 DUF951 family protein -
  FOB62_RS05290 (FOB62_05290) dnaN 1044229..1045365 (-) 1137 WP_003060971.1 DNA polymerase III subunit beta -
  FOB62_RS05295 (FOB62_05295) dnaA 1045519..1046874 (-) 1356 WP_003054481.1 chromosomal replication initiator protein DnaA -
  FOB62_RS05300 (FOB62_05300) spo0J 1047108..1047884 (-) 777 WP_003054458.1 ParB/RepB/Spo0J family partition protein Regulator
  FOB62_RS05305 (FOB62_05305) htrA 1047973..1049196 (-) 1224 WP_003054444.1 trypsin-like peptidase domain-containing protein Regulator
  FOB62_RS05310 (FOB62_05310) rlmH 1049408..1049887 (+) 480 WP_003057960.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FOB62_RS05320 (FOB62_05320) - 1050131..1051114 (-) 984 WP_014612660.1 IS30 family transposase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29136.15 Da        Isoelectric Point: 10.3001

>NTDB_id=387875 FOB62_RS05300 WP_003054458.1 1047108..1047884(-) (spo0J) [Streptococcus dysgalactiae strain FDAARGOS_654]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKTTPTQKNKNIFITSLEDQLAQSLGLPAKIKLKSTQSGQL
LLPFANQEELNRIINKLL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=387875 FOB62_RS05300 WP_003054458.1 1047108..1047884(-) (spo0J) [Streptococcus dysgalactiae strain FDAARGOS_654]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTCTCACACTAACCGACGAAAAGGAACAGTTAGTTTATGCTAATAGAATCAAAAATGAAGGGTT
AAGTGTACGACAAATTGAGCATATGGTAACTCCAAAACTCAAAACCACCCCTACCCAGAAAAATAAAAATATTTTTATCA
CTTCTTTAGAAGATCAGCTGGCCCAATCTCTAGGGCTACCAGCCAAAATCAAATTGAAATCAACTCAGAGTGGTCAATTG
CTGTTACCATTTGCTAATCAAGAGGAATTAAACAGAATTATCAACAAGTTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(9-96)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.198

99.612

0.57

Multiple sequence alignment