Detailed information NTG0038783

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: BATR1942_RS10540
• Genome accession: NC_014639
• Coordinates: 2161012..2161635 (-)
• Length: 207 a.a.
• NCBI ID: WP_003325391.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus 1942
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2156012..2166635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BATR1942_RS10515 (BATR1942_11085)	rpsT	2156306..2156572 (+)	267	WP_003325396.1	30S ribosomal protein S20	-
BATR1942_RS10520 (BATR1942_11090)	holA	2156587..2157630 (-)	1044	WP_003325395.1	DNA polymerase III subunit delta	-
BATR1942_RS21870 (BATR1942_11095)	-	2157670..2157819 (-)	150	WP_010789254.1	hypothetical protein	-
BATR1942_RS20940 (BATR1942_11100)	-	2157860..2157994 (+)	135	WP_003229983.1	YqzM family protein	-
BATR1942_RS10530 (BATR1942_11105)	comEC	2158035..2160368 (-)	2334	WP_003325393.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
BATR1942_RS10535 (BATR1942_11110)	-	2160375..2160944 (-)	570	WP_003325392.1	ComE operon protein 2	-
BATR1942_RS10540 (BATR1942_11115)	comEA	2161012..2161635 (-)	624	WP_003325391.1	helix-hairpin-helix domain-containing protein	Machinery gene
BATR1942_RS10545 (BATR1942_11120)	comER	2161719..2162540 (+)	822	WP_003325389.1	late competence protein ComER	-
BATR1942_RS10550 (BATR1942_11125)	-	2162610..2163350 (-)	741	WP_003325388.1	class I SAM-dependent methyltransferase	-
BATR1942_RS10555 (BATR1942_11130)	rsfS	2163347..2163703 (-)	357	WP_003325387.1	ribosome silencing factor	-
BATR1942_RS10560 (BATR1942_11135)	yqeK	2163720..2164280 (-)	561	WP_003325386.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
BATR1942_RS10565 (BATR1942_11140)	-	2164270..2164839 (-)	570	WP_003325385.1	nicotinate-nucleotide adenylyltransferase	-
BATR1942_RS10570 (BATR1942_11145)	yhbY	2164851..2165141 (-)	291	WP_003325384.1	ribosome assembly RNA-binding protein YhbY	-
BATR1942_RS10575 (BATR1942_11150)	aroE	2165135..2165977 (-)	843	WP_003325383.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 207 a.a.
• Molecular weight: 22063.86 Da
• Isoelectric Point: 4.7220

>NTDB_id=38783 BATR1942_RS10540 WP_003325391.1 2161012..2161635(-) (comEA) [Bacillus atrophaeus 1942]
MNWFYQHKKIILTAGAAVIFIVILLNFPGAKKQEPVQQITASPETAGTRVQQQESKGDADGEKIIIDIKGAVKHPGVYEL
KTGDRVSQAIEKAGGINSEADEKQVNLAELLQDGTVVYIPSEGEEPTQSTTANASVQNGAGKEALVNINTASLEELQAIS
GVGPSKAEAIIAYREENGKFQAVEDITNVSGIGEKSFEKIKSAITVK

Nucleotide

• Length: 624 bp

>NTDB_id=38783 BATR1942_RS10540 WP_003325391.1 2161012..2161635(-) (comEA) [Bacillus atrophaeus 1942]
ATGAATTGGTTTTACCAGCACAAAAAAATAATCTTAACGGCAGGTGCTGCTGTCATCTTCATCGTCATCCTGCTTAATTT
TCCCGGCGCAAAGAAGCAGGAGCCTGTTCAGCAAATCACAGCGTCGCCTGAAACGGCGGGCACACGAGTTCAGCAGCAAG
AATCAAAAGGTGATGCTGACGGAGAAAAAATTATCATTGATATTAAAGGCGCTGTCAAACATCCGGGTGTCTACGAATTG
AAAACGGGAGACAGAGTTTCACAGGCTATCGAAAAAGCGGGAGGCATTAATTCGGAGGCTGATGAAAAACAAGTAAATTT
AGCTGAACTCCTGCAGGACGGCACTGTCGTGTACATTCCAAGTGAGGGGGAAGAGCCAACACAAAGCACTACCGCAAATG
CTTCTGTGCAAAACGGAGCAGGAAAAGAGGCTTTGGTTAATATCAATACAGCGTCATTAGAGGAACTGCAAGCTATTTCC
GGGGTCGGTCCGTCAAAAGCAGAAGCTATAATAGCTTATCGTGAAGAAAACGGAAAATTTCAAGCCGTTGAAGACATTAC
AAATGTCTCGGGAATCGGCGAAAAATCATTTGAGAAAATAAAATCAGCCATCACAGTTAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (66-120)

• Helix-hairpin-helix motif (HHH_3) (143-205)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	65.7	100	0.657
comEA	Staphylococcus aureus MW2	36.364	100	0.367