Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FOB77_RS00280 Genome accession   NZ_CP044091
Coordinates   58412..59221 (-) Length   269 a.a.
NCBI ID   WP_001289498.1    Uniprot ID   X5KFV3
Organism   Streptococcus agalactiae strain FDAARGOS_669     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 53412..64221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB77_RS00265 (FOB77_00265) smc 53633..57172 (-) 3540 WP_000478775.1 chromosome segregation protein SMC -
  FOB77_RS00270 (FOB77_00270) rnc 57180..57866 (-) 687 WP_000661526.1 ribonuclease III -
  FOB77_RS00275 (FOB77_00275) - 58041..58409 (-) 369 WP_000719384.1 YbaN family protein -
  FOB77_RS00280 (FOB77_00280) vicX 58412..59221 (-) 810 WP_001289498.1 MBL fold metallo-hydrolase Regulator
  FOB77_RS00285 (FOB77_00285) vicK 59225..60574 (-) 1350 WP_001065469.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FOB77_RS00290 (FOB77_00290) vicR 60567..61277 (-) 711 WP_000722052.1 response regulator YycF Regulator
  FOB77_RS00295 (FOB77_00295) - 61617..62372 (+) 756 WP_000053155.1 amino acid ABC transporter ATP-binding protein -
  FOB77_RS00300 (FOB77_00300) - 62384..63184 (+) 801 WP_000946169.1 transporter substrate-binding domain-containing protein -
  FOB77_RS00305 (FOB77_00305) - 63197..63892 (+) 696 WP_000173642.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30273.24 Da        Isoelectric Point: 6.2265

>NTDB_id=387651 FOB77_RS00280 WP_001289498.1 58412..59221(-) (vicX) [Streptococcus agalactiae strain FDAARGOS_669]
MSEIGFKYSILASGSTGNCFYIETPQKRLLIDAGLTGKKVTSLLAEINRKPEDLDAILVTHEHSDHIKGVGVLARKYHLD
IYANEQTWKVMDERNMLGKVDVSQKHVFGRGKTLTFGDLDIESFGVSHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMAS
LIENADGYLIESNHDIEILRSGSYPWTLKQRILSDKGHLSNEDGSETMIRTIGNRTKHIYLGHLSKENNIKELAHMTMEN
NLMRADFGVGTDFSVHDTSPDSATPLTRI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=387651 FOB77_RS00280 WP_001289498.1 58412..59221(-) (vicX) [Streptococcus agalactiae strain FDAARGOS_669]
ATGTCAGAAATAGGATTTAAATATAGTATCTTAGCTTCAGGTTCAACTGGAAATTGTTTTTATATTGAGACACCCCAAAA
ACGTCTTTTAATTGACGCTGGTTTAACAGGCAAGAAAGTGACTAGCCTCCTTGCAGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATACTAGTTACCCACGAACATTCTGACCACATTAAAGGTGTTGGCGTATTGGCTAGGAAATATCACCTTGAT
ATTTATGCCAATGAGCAGACGTGGAAAGTTATGGATGAGCGTAACATGTTAGGCAAAGTTGATGTTAGTCAAAAGCATGT
TTTTGGACGCGGTAAAACCTTAACTTTCGGGGATTTAGATATTGAGAGCTTTGGTGTAAGTCATGATGCTGTGGATCCCC
AATTTTACCGTATGATGAAAGATGATAAGAGCTTTGTGATGTTGACAGATACAGGATATGTTAGCGACCGAATGGCAAGT
TTGATTGAGAATGCAGATGGTTATTTGATCGAGTCAAATCACGACATTGAGATTCTACGTTCGGGTTCTTATCCTTGGAC
ACTTAAGCAACGTATTTTATCAGATAAAGGACATTTATCTAATGAAGATGGTTCAGAAACCATGATTCGCACTATAGGTA
ACCGTACTAAACACATCTATTTAGGACACTTGAGTAAGGAAAATAATATTAAGGAACTTGCTCACATGACTATGGAAAAC
AATTTAATGAGAGCTGACTTTGGTGTGGGCACAGATTTTTCTGTTCACGATACTTCACCTGATTCAGCTACCCCACTGAC
GAGGATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB X5KFV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment