Detailed information NTG0387583

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FOB42_RS01175
• Genome accession: NZ_CP044089
• Coordinates: 245991..247196 (-)
• Length: 401 a.a.
• NCBI ID: WP_150348827.1
• Uniprot ID: -
• Organism: Bordetella bronchiseptica strain FDAARGOS_634
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 240991..252196

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB42_RS01155 (FOB42_01155)	phnC	241708..242478 (+)	771	WP_003808589.1	phosphonate ABC transporter ATP-binding protein	-
FOB42_RS01160 (FOB42_01160)	phnE	242466..243365 (+)	900	WP_172593696.1	phosphonate ABC transporter, permease protein PhnE	-
FOB42_RS01165 (FOB42_01165)	phnE	243362..244183 (+)	822	WP_003808584.1	phosphonate ABC transporter, permease protein PhnE	-
FOB42_RS01170 (FOB42_01170)	-	244346..245944 (+)	1599	WP_003818884.1	CYTH and CHAD domain-containing protein	-
FOB42_RS01175 (FOB42_01175)	pilA	245991..247196 (-)	1206	WP_150348827.1	signal recognition particle-docking protein FtsY	Machinery gene
FOB42_RS01180 (FOB42_01180)	rsmD	247266..247886 (+)	621	WP_015041060.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FOB42_RS01185 (FOB42_01185)	coaD	247907..248416 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
FOB42_RS01190 (FOB42_01190)	-	248471..248722 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FOB42_RS01195 (FOB42_01195)	-	248719..249936 (+)	1218	WP_015041059.1	benzoate/H(+) symporter BenE family transporter	-
FOB42_RS01200 (FOB42_01200)	-	249944..250330 (-)	387	WP_003818888.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 41820.83 Da
• Isoelectric Point: 5.5059

>NTDB_id=387583 FOB42_RS01175 WP_150348827.1 245991..247196(-) (pilA) [Bordetella bronchiseptica strain FDAARGOS_634]
MPMFSFFKKKSPPPAAPAQPAPPPEAVDAGSTAPAQPQPAEPQPAPAPVPPPEPQPEPQPQQPPEPAPPAMASPPVADSQ
PPVAEPQPAVAAAPEAPRKASWLSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVK
KERIDDPAQVKTALRQLLADHLRPLERSFDLGRAQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAR
EQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLV
VDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLA
D

Nucleotide

• Length: 1206 bp

>NTDB_id=387583 FOB42_RS01175 WP_150348827.1 245991..247196(-) (pilA) [Bordetella bronchiseptica strain FDAARGOS_634]
TTGCCCATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGT
GGACGCAGGGTCAACGGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAACCGGCCCCGGCGCCGGTCCCCCCGCCCGAGC
CGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGGCGCCGCCGGCCATGGCGTCGCCGCCTGTCGCCGATTCGCAG
CCACCGGTCGCCGAGCCGCAGCCTGCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAA
GCAGGGCCTGTCGCGCACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAAC
TGGAGTCGGCGCTGATCATGGCCGACGCCGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAG
AAAGAGCGCATCGACGATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCG
GTCCTTCGACCTGGGGCGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCG
GCAAGCTGGCGCATACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGC
GAGCAATTGGTCGAATGGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTT
CGACTCGGTCAATGCCGGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGC
ACCTGATGGAAGAATTGAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTG
GTCGATGGCAACACCGGCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGT
CACCAAGCTGGACGGCACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGG
TCTATTGGATCGGCGTGGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCGGCCGCCCTGCTGGCC
GACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (197-399)

• SRP54-type protein, helical bundle domain (SRP54_N) (117-176)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.578	100	0.511