Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FOB45_RS10020 Genome accession   NZ_CP044086
Coordinates   646358..646765 (+) Length   135 a.a.
NCBI ID   WP_010795389.1    Uniprot ID   -
Organism   Pseudomonas luteola strain FDAARGOS_637     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 641358..651765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB45_RS09990 (FOB45_09990) - 641555..642553 (-) 999 WP_019364347.1 aspartate carbamoyltransferase catalytic subunit -
  FOB45_RS09995 (FOB45_09995) pyrR 642572..643084 (-) 513 WP_010795394.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  FOB45_RS10000 (FOB45_10000) ruvX 643081..643542 (-) 462 WP_019364349.1 Holliday junction resolvase RuvX -
  FOB45_RS10005 (FOB45_10005) - 643543..644112 (-) 570 WP_150346818.1 YqgE/AlgH family protein -
  FOB45_RS10010 (FOB45_10010) - 644164..645057 (-) 894 WP_150346819.1 energy transducer TonB -
  FOB45_RS10015 (FOB45_10015) gshB 645166..646128 (-) 963 WP_010795390.1 glutathione synthase -
  FOB45_RS10020 (FOB45_10020) pilG 646358..646765 (+) 408 WP_010795389.1 twitching motility response regulator PilG Regulator
  FOB45_RS10025 (FOB45_10025) pilH 646805..647170 (+) 366 WP_010795388.1 twitching motility response regulator PilH -
  FOB45_RS10030 (FOB45_10030) - 647195..647731 (+) 537 WP_074824906.1 chemotaxis protein CheW -
  FOB45_RS10035 (FOB45_10035) - 647915..649945 (+) 2031 WP_010795386.1 methyl-accepting chemotaxis protein -
  FOB45_RS10040 (FOB45_10040) - 649976..650860 (+) 885 WP_010795385.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14960.31 Da        Isoelectric Point: 7.2431

>NTDB_id=387554 FOB45_RS10020 WP_010795389.1 646358..646765(+) (pilG) [Pseudomonas luteola strain FDAARGOS_637]
MEQYSEGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADNHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSRDGLFDKAKGRIVGSDQYLTKPFSKEELIGAIKNHVPNFTPVEHTS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=387554 FOB45_RS10020 WP_010795389.1 646358..646765(+) (pilG) [Pseudomonas luteola strain FDAARGOS_637]
ATGGAACAGTACTCCGAAGGTCTGAAGGTAATGGTAATCGATGATTCGAAAACGATTCGTCGAACCGCCGAGACGCTTCT
CAAGAAAGTAGGCTGCGAAGTTATTACTGCCGTCGATGGATTCGATGCGCTCGCAAAAATTGCGGATAACCATCCCAACA
TCATTTTCGTTGATATCATGATGCCTCGTTTGGACGGTTATCAGACCTGTGCGCTTATCAAGAACAATAGCGCATTCAAA
TCGACGCCGGTCATCATGCTTTCTTCGCGTGACGGCCTCTTTGACAAGGCTAAGGGTCGGATCGTTGGGTCCGATCAATA
CCTGACCAAACCGTTCAGCAAAGAAGAGCTGATCGGCGCAATAAAAAACCATGTGCCTAATTTTACCCCAGTCGAGCATA
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

39.516

91.852

0.363

Multiple sequence alignment