Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | HHJ31_RS18410 | Genome accession | NZ_CP051719 |
| Coordinates | 3834700..3835140 (-) | Length | 146 a.a. |
| NCBI ID | WP_000360914.1 | Uniprot ID | A0A0H2YVZ3 |
| Organism | Escherichia coli strain SCU-116 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3829700..3840140
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ31_RS18390 (HHJ31_18395) | coaE | 3830190..3830810 (-) | 621 | WP_001269535.1 | dephospho-CoA kinase | - |
| HHJ31_RS25035 | - | 3830835..3830879 (+) | 45 | WP_120795372.1 | protein YacM | - |
| HHJ31_RS18395 (HHJ31_18400) | guaC | 3831035..3832078 (+) | 1044 | WP_001217338.1 | GMP reductase | - |
| HHJ31_RS18400 (HHJ31_18405) | hofC | 3832113..3833315 (-) | 1203 | WP_021531956.1 | protein transport protein HofC | - |
| HHJ31_RS18405 (HHJ31_18410) | pilB | 3833305..3834690 (-) | 1386 | WP_001025178.1 | type II secretion system protein GspE | Machinery gene |
| HHJ31_RS18410 (HHJ31_18415) | pilA | 3834700..3835140 (-) | 441 | WP_000360914.1 | prepilin peptidase-dependent pilin | Machinery gene |
| HHJ31_RS18415 (HHJ31_18420) | nadC | 3835344..3836237 (-) | 894 | WP_001135168.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| HHJ31_RS18420 (HHJ31_18425) | ampD | 3836325..3836876 (+) | 552 | WP_000923703.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| HHJ31_RS18425 (HHJ31_18430) | ampE | 3836873..3837727 (+) | 855 | WP_000171983.1 | beta-lactamase regulator AmpE | - |
| HHJ31_RS18430 (HHJ31_18435) | aroP | 3837770..3839140 (-) | 1371 | WP_000399017.1 | aromatic amino acid transporter AroP | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15620.77 Da Isoelectric Point: 4.5237
>NTDB_id=387359 HHJ31_RS18410 WP_000360914.1 3834700..3835140(-) (pilA) [Escherichia coli strain SCU-116]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLNTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLNTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=387359 HHJ31_RS18410 WP_000360914.1 3834700..3835140(-) (pilA) [Escherichia coli strain SCU-116]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAAATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACGCCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGTAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAAATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACGCCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGTAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |