Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FOB72_RS13090 | Genome accession | NZ_CP044065 |
| Coordinates | 2858765..2860042 (+) | Length | 425 a.a. |
| NCBI ID | WP_150372908.1 | Uniprot ID | A0A5P2H6B7 |
| Organism | Cupriavidus pauculus strain FDAARGOS_664 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2853765..2865042
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB72_RS13065 (FOB72_13060) | - | 2854067..2854327 (-) | 261 | WP_109582191.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| FOB72_RS13070 (FOB72_13065) | coaD | 2854400..2854885 (-) | 486 | WP_150372905.1 | pantetheine-phosphate adenylyltransferase | - |
| FOB72_RS13075 (FOB72_13070) | rsmD | 2854968..2855495 (-) | 528 | WP_411859833.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| FOB72_RS13080 (FOB72_13075) | - | 2855711..2857066 (-) | 1356 | WP_150372906.1 | M16 family metallopeptidase | - |
| FOB72_RS13085 (FOB72_13080) | - | 2857117..2858703 (-) | 1587 | WP_150372907.1 | M16 family metallopeptidase | - |
| FOB72_RS13090 (FOB72_13085) | pilA | 2858765..2860042 (+) | 1278 | WP_150372908.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| FOB72_RS13095 (FOB72_13090) | maiA | 2860072..2860716 (-) | 645 | WP_150373895.1 | maleylacetoacetate isomerase | - |
| FOB72_RS13100 (FOB72_13095) | - | 2860723..2861424 (-) | 702 | WP_150372909.1 | fumarylacetoacetate hydrolase family protein | - |
| FOB72_RS13105 (FOB72_13100) | - | 2861631..2862260 (+) | 630 | WP_150372910.1 | ANTAR domain-containing response regulator | - |
| FOB72_RS13110 (FOB72_13105) | - | 2862576..2863883 (+) | 1308 | WP_150372911.1 | CmpA/NrtA family ABC transporter substrate-binding protein | - |
| FOB72_RS13115 (FOB72_13110) | ntrB | 2863933..2864832 (+) | 900 | WP_150372912.1 | nitrate ABC transporter permease | - |
Sequence
Protein
Download Length: 425 a.a. Molecular weight: 44460.99 Da Isoelectric Point: 7.2851
>NTDB_id=387356 FOB72_RS13090 WP_150372908.1 2858765..2860042(+) (pilA) [Cupriavidus pauculus strain FDAARGOS_664]
MFSFWKKRKAEPAPAPAEPPVAAPVAPPPTLAPAPTPAPAVPPTPAPTPAPAPIPAPVPVPVPTPTPIPTPAPVPAPVPA
PVPAPVPVPVPVPAQVPPPPPAPVAMVAPAAVEELELTPPPAPTAEAKRGWMTRLRAGLSKTSRNIGTLFVGVKVDEALF
EELETALLMADAGVEATEYLLGELRRRVKSERIETAEGVKAALRALLIDLLRPLEKSMALGREQPLVMMIAGVNGAGKTT
SIGKLCKHFQNYGQSVLLAAGDTFRAAAREQLTIWGERNNVMVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPT
QLHLMEELKKVKRVIGKAMPSAPHEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVY
FIGVGEKVEDLQPFRADEFADALLG
MFSFWKKRKAEPAPAPAEPPVAAPVAPPPTLAPAPTPAPAVPPTPAPTPAPAPIPAPVPVPVPTPTPIPTPAPVPAPVPA
PVPAPVPVPVPVPAQVPPPPPAPVAMVAPAAVEELELTPPPAPTAEAKRGWMTRLRAGLSKTSRNIGTLFVGVKVDEALF
EELETALLMADAGVEATEYLLGELRRRVKSERIETAEGVKAALRALLIDLLRPLEKSMALGREQPLVMMIAGVNGAGKTT
SIGKLCKHFQNYGQSVLLAAGDTFRAAAREQLTIWGERNNVMVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPT
QLHLMEELKKVKRVIGKAMPSAPHEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVY
FIGVGEKVEDLQPFRADEFADALLG
Nucleotide
Download Length: 1278 bp
>NTDB_id=387356 FOB72_RS13090 WP_150372908.1 2858765..2860042(+) (pilA) [Cupriavidus pauculus strain FDAARGOS_664]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAACCGGCTCCTGCGCCCGCCGAGCCGCCGGTCGCAGCCCCCGTCGCCCC
GCCCCCCACCCTCGCACCCGCGCCGACGCCCGCGCCGGCCGTCCCACCCACGCCTGCGCCCACGCCTGCGCCCGCGCCGA
TCCCGGCTCCGGTGCCCGTGCCTGTTCCGACACCGACCCCGATCCCGACGCCCGCCCCGGTGCCTGCGCCAGTGCCTGCG
CCAGTGCCTGCGCCAGTGCCGGTTCCCGTGCCCGTCCCGGCCCAGGTGCCGCCCCCTCCCCCGGCGCCAGTCGCCATGGT
GGCTCCCGCCGCTGTGGAGGAACTCGAACTCACGCCGCCCCCGGCCCCCACCGCCGAAGCCAAGCGCGGCTGGATGACGC
GGCTGCGCGCGGGCCTCTCCAAGACCAGCCGCAATATCGGCACGCTGTTCGTCGGCGTGAAGGTCGACGAGGCACTGTTC
GAGGAACTGGAAACCGCGCTGCTGATGGCCGATGCGGGGGTCGAGGCCACCGAATACCTGCTGGGCGAGCTGCGCCGCCG
CGTGAAGAGCGAGCGCATCGAAACGGCCGAGGGCGTCAAGGCCGCGCTGCGCGCGCTGTTGATCGACCTGCTGCGTCCGC
TCGAGAAATCGATGGCGCTCGGCCGCGAGCAGCCGCTCGTGATGATGATCGCGGGCGTGAACGGCGCCGGCAAGACCACG
AGCATCGGCAAGCTCTGCAAGCACTTCCAGAACTACGGACAGTCCGTGCTGCTGGCCGCCGGCGATACGTTCCGCGCCGC
CGCGCGCGAGCAGCTGACGATCTGGGGCGAGCGCAACAACGTGATGGTGGTGGCGCAGGAAAGCGGCGACCCGGCCGCCG
TGATCTTCGACGCGGTGAACGCAGCCCGCGCGCGCGGCATCGATATCGTCATGGCCGATACCGCGGGCCGGCTGCCGACG
CAGCTGCACCTGATGGAAGAGCTCAAGAAGGTCAAGCGCGTGATCGGCAAGGCGATGCCCTCGGCCCCGCACGAGGTGCT
GCTCGTGATCGACGCCAACACCGGGCAGAACGCGCTCGCGCAGACGCGCGCGTTCGACGACGCGCTCGGCCTGACCGGCC
TCATCGTGACCAAGCTCGACGGGACCGCCAAGGGCGGCATCCTCGCCGCCATCGCGCGCCAGCGTCCGGTGCCGGTCTAT
TTCATCGGTGTCGGAGAAAAGGTCGAGGACCTGCAGCCGTTCAGGGCCGACGAATTCGCGGACGCTTTGCTAGGTTAA
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAACCGGCTCCTGCGCCCGCCGAGCCGCCGGTCGCAGCCCCCGTCGCCCC
GCCCCCCACCCTCGCACCCGCGCCGACGCCCGCGCCGGCCGTCCCACCCACGCCTGCGCCCACGCCTGCGCCCGCGCCGA
TCCCGGCTCCGGTGCCCGTGCCTGTTCCGACACCGACCCCGATCCCGACGCCCGCCCCGGTGCCTGCGCCAGTGCCTGCG
CCAGTGCCTGCGCCAGTGCCGGTTCCCGTGCCCGTCCCGGCCCAGGTGCCGCCCCCTCCCCCGGCGCCAGTCGCCATGGT
GGCTCCCGCCGCTGTGGAGGAACTCGAACTCACGCCGCCCCCGGCCCCCACCGCCGAAGCCAAGCGCGGCTGGATGACGC
GGCTGCGCGCGGGCCTCTCCAAGACCAGCCGCAATATCGGCACGCTGTTCGTCGGCGTGAAGGTCGACGAGGCACTGTTC
GAGGAACTGGAAACCGCGCTGCTGATGGCCGATGCGGGGGTCGAGGCCACCGAATACCTGCTGGGCGAGCTGCGCCGCCG
CGTGAAGAGCGAGCGCATCGAAACGGCCGAGGGCGTCAAGGCCGCGCTGCGCGCGCTGTTGATCGACCTGCTGCGTCCGC
TCGAGAAATCGATGGCGCTCGGCCGCGAGCAGCCGCTCGTGATGATGATCGCGGGCGTGAACGGCGCCGGCAAGACCACG
AGCATCGGCAAGCTCTGCAAGCACTTCCAGAACTACGGACAGTCCGTGCTGCTGGCCGCCGGCGATACGTTCCGCGCCGC
CGCGCGCGAGCAGCTGACGATCTGGGGCGAGCGCAACAACGTGATGGTGGTGGCGCAGGAAAGCGGCGACCCGGCCGCCG
TGATCTTCGACGCGGTGAACGCAGCCCGCGCGCGCGGCATCGATATCGTCATGGCCGATACCGCGGGCCGGCTGCCGACG
CAGCTGCACCTGATGGAAGAGCTCAAGAAGGTCAAGCGCGTGATCGGCAAGGCGATGCCCTCGGCCCCGCACGAGGTGCT
GCTCGTGATCGACGCCAACACCGGGCAGAACGCGCTCGCGCAGACGCGCGCGTTCGACGACGCGCTCGGCCTGACCGGCC
TCATCGTGACCAAGCTCGACGGGACCGCCAAGGGCGGCATCCTCGCCGCCATCGCGCGCCAGCGTCCGGTGCCGGTCTAT
TTCATCGGTGTCGGAGAAAAGGTCGAGGACCTGCAGCCGTTCAGGGCCGACGAATTCGCGGACGCTTTGCTAGGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
50.583 |
100 |
0.511 |