Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | FOB75_RS14475 | Genome accession | NZ_CP044062 |
| Coordinates | 2854984..2855562 (+) | Length | 192 a.a. |
| NCBI ID | WP_015297396.1 | Uniprot ID | A0A243VIJ8 |
| Organism | Vibrio parahaemolyticus strain FDAARGOS_667 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2849984..2860562
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB75_RS14460 (FOB75_14460) | oxyR | 2850307..2851215 (+) | 909 | WP_005465160.1 | DNA-binding transcriptional regulator OxyR | - |
| FOB75_RS14465 (FOB75_14465) | - | 2851271..2853841 (-) | 2571 | WP_005496567.1 | penicillin-binding protein 1A | - |
| FOB75_RS14470 (FOB75_14470) | pilM | 2853984..2855000 (+) | 1017 | WP_021449761.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| FOB75_RS14475 (FOB75_14475) | pilN | 2854984..2855562 (+) | 579 | WP_015297396.1 | PilN domain-containing protein | Machinery gene |
| FOB75_RS14480 (FOB75_14480) | pilO | 2855555..2856148 (+) | 594 | WP_045607680.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FOB75_RS14485 (FOB75_14485) | pilP | 2856138..2856653 (+) | 516 | WP_029864056.1 | pilus assembly protein PilP | Machinery gene |
| FOB75_RS14490 (FOB75_14490) | pilQ | 2856685..2858433 (+) | 1749 | WP_005488227.1 | type IV pilus secretin PilQ | Machinery gene |
| FOB75_RS14495 (FOB75_14495) | aroK | 2858622..2859140 (+) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| FOB75_RS14500 (FOB75_14500) | aroB | 2859172..2860272 (+) | 1101 | WP_031817354.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22438.95 Da Isoelectric Point: 6.9944
>NTDB_id=387300 FOB75_RS14475 WP_015297396.1 2854984..2855562(+) (pilN) [Vibrio parahaemolyticus strain FDAARGOS_667]
MLYRINLLPWRENQREEHRRRFVGLVVLGVMVALGIQWGVGKYYEYQQDLQQERLDYLTTYISDLDKRIEAMKIAELEHS
KILERLKVVEALQNGRNKTTDFMNLMPAVIPEGVYVDKIKMNDLEIEISGISDSTPRLATMLDNMERSAKLLDVEMHSIV
HGKARFGKEFQTFKVSFMFNTVEEKKEGKQHG
MLYRINLLPWRENQREEHRRRFVGLVVLGVMVALGIQWGVGKYYEYQQDLQQERLDYLTTYISDLDKRIEAMKIAELEHS
KILERLKVVEALQNGRNKTTDFMNLMPAVIPEGVYVDKIKMNDLEIEISGISDSTPRLATMLDNMERSAKLLDVEMHSIV
HGKARFGKEFQTFKVSFMFNTVEEKKEGKQHG
Nucleotide
Download Length: 579 bp
>NTDB_id=387300 FOB75_RS14475 WP_015297396.1 2854984..2855562(+) (pilN) [Vibrio parahaemolyticus strain FDAARGOS_667]
GTGCTGTATCGCATTAACTTATTGCCTTGGCGCGAAAATCAAAGGGAAGAGCATCGTCGTCGATTTGTCGGTTTAGTGGT
ATTGGGCGTCATGGTGGCGTTGGGGATTCAGTGGGGCGTTGGCAAATATTATGAGTACCAACAAGATCTTCAACAAGAGC
GACTCGACTATCTAACAACGTACATTTCCGATCTAGATAAGCGGATAGAAGCGATGAAGATCGCGGAGCTTGAACACAGC
AAAATCTTGGAACGCTTGAAAGTTGTGGAAGCGTTGCAAAATGGTCGGAATAAAACCACTGATTTTATGAACCTCATGCC
TGCTGTTATTCCAGAAGGCGTATATGTCGACAAGATCAAAATGAACGATCTAGAAATTGAAATCTCAGGTATTTCAGACA
GTACACCTCGGCTAGCAACCATGCTCGATAACATGGAACGTTCTGCCAAGCTACTGGACGTTGAAATGCACTCTATCGTG
CACGGAAAAGCCCGTTTCGGTAAAGAGTTTCAGACCTTTAAAGTGTCCTTCATGTTCAACACGGTAGAAGAGAAAAAAGA
GGGAAAACAACATGGTTAA
GTGCTGTATCGCATTAACTTATTGCCTTGGCGCGAAAATCAAAGGGAAGAGCATCGTCGTCGATTTGTCGGTTTAGTGGT
ATTGGGCGTCATGGTGGCGTTGGGGATTCAGTGGGGCGTTGGCAAATATTATGAGTACCAACAAGATCTTCAACAAGAGC
GACTCGACTATCTAACAACGTACATTTCCGATCTAGATAAGCGGATAGAAGCGATGAAGATCGCGGAGCTTGAACACAGC
AAAATCTTGGAACGCTTGAAAGTTGTGGAAGCGTTGCAAAATGGTCGGAATAAAACCACTGATTTTATGAACCTCATGCC
TGCTGTTATTCCAGAAGGCGTATATGTCGACAAGATCAAAATGAACGATCTAGAAATTGAAATCTCAGGTATTTCAGACA
GTACACCTCGGCTAGCAACCATGCTCGATAACATGGAACGTTCTGCCAAGCTACTGGACGTTGAAATGCACTCTATCGTG
CACGGAAAAGCCCGTTTCGGTAAAGAGTTTCAGACCTTTAAAGTGTCCTTCATGTTCAACACGGTAGAAGAGAAAAAAGA
GGGAAAACAACATGGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio campbellii strain DS40M4 |
83.333 |
100 |
0.833 |
| pilN | Vibrio cholerae strain A1552 |
62.983 |
94.271 |
0.594 |