Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | FOB75_RS14485 | Genome accession | NZ_CP044062 |
| Coordinates | 2856138..2856653 (+) | Length | 171 a.a. |
| NCBI ID | WP_029864056.1 | Uniprot ID | A0A9P2QTX5 |
| Organism | Vibrio parahaemolyticus strain FDAARGOS_667 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2851138..2861653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB75_RS14465 (FOB75_14465) | - | 2851271..2853841 (-) | 2571 | WP_005496567.1 | penicillin-binding protein 1A | - |
| FOB75_RS14470 (FOB75_14470) | pilM | 2853984..2855000 (+) | 1017 | WP_021449761.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| FOB75_RS14475 (FOB75_14475) | pilN | 2854984..2855562 (+) | 579 | WP_015297396.1 | PilN domain-containing protein | Machinery gene |
| FOB75_RS14480 (FOB75_14480) | pilO | 2855555..2856148 (+) | 594 | WP_045607680.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FOB75_RS14485 (FOB75_14485) | pilP | 2856138..2856653 (+) | 516 | WP_029864056.1 | pilus assembly protein PilP | Machinery gene |
| FOB75_RS14490 (FOB75_14490) | pilQ | 2856685..2858433 (+) | 1749 | WP_005488227.1 | type IV pilus secretin PilQ | Machinery gene |
| FOB75_RS14495 (FOB75_14495) | aroK | 2858622..2859140 (+) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| FOB75_RS14500 (FOB75_14500) | aroB | 2859172..2860272 (+) | 1101 | WP_031817354.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18942.12 Da Isoelectric Point: 10.5314
>NTDB_id=387302 FOB75_RS14485 WP_029864056.1 2856138..2856653(+) (pilP) [Vibrio parahaemolyticus strain FDAARGOS_667]
MRNKSLLTVLVSALLVGCQANDESLTDFIRGIESQARRDVEKLKPADKYIAVAYAPEVMRAPFELPKEATIATQPVARKD
CWQPPNRARSGKLEKFPLSQLRLKGVMGMGNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVTHSYLLINETLPDGLGC
WQKRKVKLALR
MRNKSLLTVLVSALLVGCQANDESLTDFIRGIESQARRDVEKLKPADKYIAVAYAPEVMRAPFELPKEATIATQPVARKD
CWQPPNRARSGKLEKFPLSQLRLKGVMGMGNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVTHSYLLINETLPDGLGC
WQKRKVKLALR
Nucleotide
Download Length: 516 bp
>NTDB_id=387302 FOB75_RS14485 WP_029864056.1 2856138..2856653(+) (pilP) [Vibrio parahaemolyticus strain FDAARGOS_667]
ATGAGAAATAAATCTTTGCTGACGGTATTGGTAAGCGCTCTATTGGTCGGCTGCCAGGCGAATGATGAATCATTAACGGA
TTTTATTCGTGGTATTGAGAGTCAGGCGCGGCGAGATGTGGAGAAGCTCAAACCTGCTGACAAATACATCGCAGTGGCGT
ATGCCCCAGAAGTGATGCGTGCTCCTTTCGAATTGCCCAAAGAGGCGACCATCGCGACTCAACCTGTGGCGAGAAAAGAT
TGTTGGCAACCGCCGAACCGAGCGAGATCTGGCAAGTTAGAAAAATTCCCACTCAGCCAACTTCGTTTAAAAGGAGTGAT
GGGTATGGGGAACACCGTTTCTGGTTTAGTTCAAGCCCCGAATGGCACGGTTTACAAAGTGAAACCAGGTCAATACCTCG
GGCGTAATAACGGTAAGGTCACCCATGTTACCCACTCCTATTTGTTGATTAATGAAACCTTGCCCGATGGTTTGGGGTGC
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
ATGAGAAATAAATCTTTGCTGACGGTATTGGTAAGCGCTCTATTGGTCGGCTGCCAGGCGAATGATGAATCATTAACGGA
TTTTATTCGTGGTATTGAGAGTCAGGCGCGGCGAGATGTGGAGAAGCTCAAACCTGCTGACAAATACATCGCAGTGGCGT
ATGCCCCAGAAGTGATGCGTGCTCCTTTCGAATTGCCCAAAGAGGCGACCATCGCGACTCAACCTGTGGCGAGAAAAGAT
TGTTGGCAACCGCCGAACCGAGCGAGATCTGGCAAGTTAGAAAAATTCCCACTCAGCCAACTTCGTTTAAAAGGAGTGAT
GGGTATGGGGAACACCGTTTCTGGTTTAGTTCAAGCCCCGAATGGCACGGTTTACAAAGTGAAACCAGGTCAATACCTCG
GGCGTAATAACGGTAAGGTCACCCATGTTACCCACTCCTATTTGTTGATTAATGAAACCTTGCCCGATGGTTTGGGGTGC
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
83.041 |
100 |
0.83 |
| pilP | Vibrio cholerae strain A1552 |
57.558 |
100 |
0.579 |