Detailed information
Bioinformatically predicted
Overview
| Name | comF | Type | Machinery gene |
| Locus tag | FHP22_RS13190 | Genome accession | NZ_CP044018 |
| Coordinates | 2725968..2726603 (+) | Length | 211 a.a. |
| NCBI ID | WP_127799311.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain HY20 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2720968..2731603
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FHP22_RS13180 (FHP22_13180) | - | 2723087..2723902 (-) | 816 | WP_127799315.1 | NAD(P)H-binding protein | - |
| FHP22_RS13185 (FHP22_13185) | recG | 2723936..2725981 (+) | 2046 | WP_127799313.1 | ATP-dependent DNA helicase RecG | - |
| FHP22_RS13190 (FHP22_13190) | comF | 2725968..2726603 (+) | 636 | WP_127799311.1 | ComF family protein | Machinery gene |
| FHP22_RS13195 (FHP22_13195) | - | 2726628..2727029 (-) | 402 | WP_127799309.1 | NUDIX hydrolase | - |
| FHP22_RS13200 (FHP22_13200) | - | 2727032..2727625 (-) | 594 | WP_005180318.1 | TIGR00730 family Rossman fold protein | - |
| FHP22_RS13205 (FHP22_13205) | - | 2727778..2728791 (+) | 1014 | WP_005180320.1 | CorA family divalent cation transporter | - |
| FHP22_RS16355 (FHP22_13210) | - | 2728935..2730237 (-) | 1303 | Protein_2556 | IS4 family transposase | - |
| FHP22_RS13215 (FHP22_13215) | - | 2730333..2730620 (-) | 288 | WP_127799307.1 | STAS domain-containing protein | - |
| FHP22_RS13220 (FHP22_13220) | - | 2730632..2731264 (-) | 633 | WP_127799305.1 | phospholipid-binding protein MlaC | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 24419.45 Da Isoelectric Point: 9.2088
>NTDB_id=387077 FHP22_RS13190 WP_127799311.1 2725968..2726603(+) (comF) [Acinetobacter indicus strain HY20]
MPMFKLLAHSHTLFKKLLPCQLCGSAAQQQYRVCADCLQQLPWLKANVYRQETEIQVACHYRYPVDRMIQQFKYEQQLHY
QPLLAGSLCELAYPRVQAIVPMPVATERLAERGYHHTLLLAQVLARHLQLPIWQPVVRRHQHSQKGLSRLERLENLDQQF
QLRPDTGRPYRRVLIVDDVVTTGSSIRALKQQLEQLGCHKVYAVCIASADG
MPMFKLLAHSHTLFKKLLPCQLCGSAAQQQYRVCADCLQQLPWLKANVYRQETEIQVACHYRYPVDRMIQQFKYEQQLHY
QPLLAGSLCELAYPRVQAIVPMPVATERLAERGYHHTLLLAQVLARHLQLPIWQPVVRRHQHSQKGLSRLERLENLDQQF
QLRPDTGRPYRRVLIVDDVVTTGSSIRALKQQLEQLGCHKVYAVCIASADG
Nucleotide
Download Length: 636 bp
>NTDB_id=387077 FHP22_RS13190 WP_127799311.1 2725968..2726603(+) (comF) [Acinetobacter indicus strain HY20]
ATGCCTATGTTTAAGCTGCTGGCGCATAGCCATACGCTCTTTAAAAAGTTACTGCCCTGCCAGCTCTGTGGCAGTGCGGC
CCAGCAGCAGTACCGGGTCTGTGCAGACTGTTTGCAGCAACTGCCATGGTTAAAAGCAAACGTCTACCGGCAGGAAACCG
AGATTCAGGTGGCCTGTCATTATCGTTATCCAGTCGACCGGATGATTCAGCAATTCAAATATGAGCAGCAATTGCATTAT
CAGCCTTTACTGGCGGGCAGCCTGTGTGAATTGGCCTATCCACGGGTACAGGCCATTGTCCCGATGCCGGTGGCAACCGA
GCGACTGGCAGAGCGTGGTTATCATCATACCCTGCTGCTGGCTCAGGTGCTGGCACGCCATTTACAGCTACCAATCTGGC
AACCGGTTGTACGGCGCCATCAACACAGTCAAAAAGGCTTAAGCCGGCTGGAACGACTGGAAAATCTGGACCAGCAATTC
CAGCTACGGCCCGATACCGGCCGGCCCTATCGCCGGGTGTTAATTGTCGATGATGTGGTCACCACCGGCAGCTCAATTCG
TGCGCTAAAACAGCAGCTGGAGCAACTTGGCTGTCACAAGGTCTATGCGGTGTGTATTGCCAGTGCCGACGGATAA
ATGCCTATGTTTAAGCTGCTGGCGCATAGCCATACGCTCTTTAAAAAGTTACTGCCCTGCCAGCTCTGTGGCAGTGCGGC
CCAGCAGCAGTACCGGGTCTGTGCAGACTGTTTGCAGCAACTGCCATGGTTAAAAGCAAACGTCTACCGGCAGGAAACCG
AGATTCAGGTGGCCTGTCATTATCGTTATCCAGTCGACCGGATGATTCAGCAATTCAAATATGAGCAGCAATTGCATTAT
CAGCCTTTACTGGCGGGCAGCCTGTGTGAATTGGCCTATCCACGGGTACAGGCCATTGTCCCGATGCCGGTGGCAACCGA
GCGACTGGCAGAGCGTGGTTATCATCATACCCTGCTGCTGGCTCAGGTGCTGGCACGCCATTTACAGCTACCAATCTGGC
AACCGGTTGTACGGCGCCATCAACACAGTCAAAAAGGCTTAAGCCGGCTGGAACGACTGGAAAATCTGGACCAGCAATTC
CAGCTACGGCCCGATACCGGCCGGCCCTATCGCCGGGTGTTAATTGTCGATGATGTGGTCACCACCGGCAGCTCAATTCG
TGCGCTAAAACAGCAGCTGGAGCAACTTGGCTGTCACAAGGTCTATGCGGTGTGTATTGCCAGTGCCGACGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comF | Acinetobacter baumannii strain A118 |
55.502 |
99.052 |
0.55 |
| comF | Acinetobacter baumannii D1279779 |
55.502 |
99.052 |
0.55 |