Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FHP22_RS06645 | Genome accession | NZ_CP044018 |
| Coordinates | 1356278..1356622 (+) | Length | 114 a.a. |
| NCBI ID | WP_035363078.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain HY20 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1351278..1361622
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FHP22_RS06615 (FHP22_06615) | kdsB | 1351977..1352741 (+) | 765 | WP_104488987.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| FHP22_RS06620 (FHP22_06620) | - | 1352750..1353733 (+) | 984 | WP_075166783.1 | DNA polymerase III subunit delta' | - |
| FHP22_RS06625 (FHP22_06625) | - | 1353745..1354086 (+) | 342 | WP_005177501.1 | PilZ domain-containing protein | - |
| FHP22_RS06630 (FHP22_06630) | - | 1354116..1354889 (+) | 774 | WP_005177502.1 | TatD family hydrolase | - |
| FHP22_RS06635 (FHP22_06635) | - | 1354949..1355563 (+) | 615 | WP_005177503.1 | TetR/AcrR family transcriptional regulator | - |
| FHP22_RS06640 (FHP22_06640) | - | 1355569..1356141 (+) | 573 | WP_152342356.1 | type II secretion system protein | - |
| FHP22_RS06645 (FHP22_06645) | xcpV | 1356278..1356622 (+) | 345 | WP_035363078.1 | type II secretion system protein | Machinery gene |
| FHP22_RS06650 (FHP22_06650) | xcpW | 1356619..1357254 (+) | 636 | WP_152342358.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FHP22_RS06655 (FHP22_06655) | gspK | 1357300..1358247 (+) | 948 | WP_152342359.1 | type II secretion system minor pseudopilin GspK | - |
| FHP22_RS06660 (FHP22_06660) | - | 1358395..1358991 (+) | 597 | WP_005177512.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| FHP22_RS06665 (FHP22_06665) | ung | 1359033..1359746 (+) | 714 | WP_005177514.1 | uracil-DNA glycosylase | - |
| FHP22_RS06670 (FHP22_06670) | - | 1359743..1360867 (+) | 1125 | WP_005177517.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FHP22_RS06675 (FHP22_06675) | tadA | 1360871..1361392 (+) | 522 | WP_127799402.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12588.33 Da Isoelectric Point: 6.2041
>NTDB_id=387066 FHP22_RS06645 WP_035363078.1 1356278..1356622(+) (xcpV) [Acinetobacter indicus strain HY20]
MVALAIFATAAMALTQVAMQYTQSTSHAILRTKAQFVALNEQALMEIQQDWLTGTQSKQVTLQGESWQIDKSAQPTISPN
VQRVEVQVSLFNLDTGQVEAGITHLVFFNHRAAQ
MVALAIFATAAMALTQVAMQYTQSTSHAILRTKAQFVALNEQALMEIQQDWLTGTQSKQVTLQGESWQIDKSAQPTISPN
VQRVEVQVSLFNLDTGQVEAGITHLVFFNHRAAQ
Nucleotide
Download Length: 345 bp
>NTDB_id=387066 FHP22_RS06645 WP_035363078.1 1356278..1356622(+) (xcpV) [Acinetobacter indicus strain HY20]
ATGGTGGCACTGGCGATTTTCGCTACAGCTGCCATGGCGCTGACTCAAGTGGCCATGCAATATACCCAGTCGACCTCTCA
TGCCATTTTAAGAACCAAAGCGCAGTTTGTGGCCTTAAACGAACAGGCATTAATGGAAATCCAGCAGGACTGGCTCACGG
GTACGCAATCAAAGCAGGTCACCCTGCAAGGTGAAAGCTGGCAAATTGATAAAAGCGCACAGCCCACCATTAGCCCGAAT
GTGCAGCGGGTAGAAGTGCAGGTCAGCTTATTTAACCTCGATACCGGTCAGGTTGAAGCCGGCATCACCCATTTGGTGTT
TTTTAATCATCGGGCGGCGCAATGA
ATGGTGGCACTGGCGATTTTCGCTACAGCTGCCATGGCGCTGACTCAAGTGGCCATGCAATATACCCAGTCGACCTCTCA
TGCCATTTTAAGAACCAAAGCGCAGTTTGTGGCCTTAAACGAACAGGCATTAATGGAAATCCAGCAGGACTGGCTCACGG
GTACGCAATCAAAGCAGGTCACCCTGCAAGGTGAAAGCTGGCAAATTGATAAAAGCGCACAGCCCACCATTAGCCCGAAT
GTGCAGCGGGTAGAAGTGCAGGTCAGCTTATTTAACCTCGATACCGGTCAGGTTGAAGCCGGCATCACCCATTTGGTGTT
TTTTAATCATCGGGCGGCGCAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
76.364 |
96.491 |
0.737 |