Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | FVA82_RS26910 | Genome accession | NZ_CP044006 |
| Coordinates | 5580138..5580695 (+) | Length | 185 a.a. |
| NCBI ID | WP_003102600.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain E90 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5575138..5585695
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVA82_RS26890 (FVA82_26890) | pilR | 5576414..5577751 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| FVA82_RS26895 (FVA82_26895) | thiO | 5577797..5578891 (-) | 1095 | WP_020750388.1 | glycine oxidase ThiO | - |
| FVA82_RS26900 (FVA82_26900) | - | 5579026..5579535 (+) | 510 | WP_003102595.1 | Tfp pilus assembly protein FimT/FimU | - |
| FVA82_RS26905 (FVA82_26905) | - | 5579641..5580147 (+) | 507 | WP_003102598.1 | Tfp pilus assembly protein FimT/FimU | - |
| FVA82_RS26910 (FVA82_26910) | pilV | 5580138..5580695 (+) | 558 | WP_003102600.1 | type 4a pilus minor pilin PilV | Machinery gene |
| FVA82_RS26915 (FVA82_26915) | pilW | 5580692..5581516 (+) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| FVA82_RS26920 (FVA82_26920) | pilX | 5581513..5582100 (+) | 588 | WP_003102605.1 | type 4a pilus minor pilin PilX | - |
| FVA82_RS26925 (FVA82_26925) | pilY1 | 5582112..5585603 (+) | 3492 | WP_003102607.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20047.13 Da Isoelectric Point: 8.2254
>NTDB_id=387009 FVA82_RS26910 WP_003102600.1 5580138..5580695(+) (pilV) [Pseudomonas aeruginosa strain E90]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVDRNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVDRNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=387009 FVA82_RS26910 WP_003102600.1 5580138..5580695(+) (pilV) [Pseudomonas aeruginosa strain E90]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGATCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTAGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGATCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTAGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |