Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | F3P16_RS10260 | Genome accession | NZ_CP043953 |
| Coordinates | 2179916..2180296 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain K09-14 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2174916..2185296
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3P16_RS10230 (F3P16_10230) | tadA | 2175035..2175538 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| F3P16_RS10235 (F3P16_10235) | - | 2175545..2176669 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| F3P16_RS10240 (F3P16_10240) | ung | 2176666..2177379 (-) | 714 | WP_001177530.1 | uracil-DNA glycosylase | - |
| F3P16_RS10245 (F3P16_10245) | - | 2177430..2178026 (-) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| F3P16_RS10250 (F3P16_10250) | gspK | 2178256..2179215 (-) | 960 | WP_065708422.1 | type II secretion system minor pseudopilin GspK | - |
| F3P16_RS10255 (F3P16_10255) | xcpW | 2179215..2179916 (-) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| F3P16_RS10260 (F3P16_10260) | xcpV | 2179916..2180296 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| F3P16_RS10265 (F3P16_10265) | - | 2180286..2180840 (-) | 555 | WP_000841372.1 | type II secretion system protein | - |
| F3P16_RS10270 (F3P16_10270) | - | 2180850..2181458 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| F3P16_RS10275 (F3P16_10275) | - | 2181496..2182269 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| F3P16_RS10280 (F3P16_10280) | - | 2182287..2182628 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| F3P16_RS10285 (F3P16_10285) | - | 2182640..2183620 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| F3P16_RS10290 (F3P16_10290) | kdsB | 2183632..2184393 (-) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=386783 F3P16_RS10260 WP_000836911.1 2179916..2180296(-) (xcpV) [Acinetobacter baumannii strain K09-14]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=386783 F3P16_RS10260 WP_000836911.1 2179916..2180296(-) (xcpV) [Acinetobacter baumannii strain K09-14]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |