Detailed information NTG0386782

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: F3P16_RS10255
• Genome accession: NZ_CP043953
• Coordinates: 2179215..2179916 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain K09-14
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2174215..2184916

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F3P16_RS10225 (F3P16_10225)	-	2174522..2174965 (-)	444	WP_001246675.1	SRPBCC family protein	-
F3P16_RS10230 (F3P16_10230)	tadA	2175035..2175538 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
F3P16_RS10235 (F3P16_10235)	-	2175545..2176669 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
F3P16_RS10240 (F3P16_10240)	ung	2176666..2177379 (-)	714	WP_001177530.1	uracil-DNA glycosylase	-
F3P16_RS10245 (F3P16_10245)	-	2177430..2178026 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
F3P16_RS10250 (F3P16_10250)	gspK	2178256..2179215 (-)	960	WP_065708422.1	type II secretion system minor pseudopilin GspK	-
F3P16_RS10255 (F3P16_10255)	xcpW	2179215..2179916 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
F3P16_RS10260 (F3P16_10260)	xcpV	2179916..2180296 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
F3P16_RS10265 (F3P16_10265)	-	2180286..2180840 (-)	555	WP_000841372.1	type II secretion system protein	-
F3P16_RS10270 (F3P16_10270)	-	2180850..2181458 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
F3P16_RS10275 (F3P16_10275)	-	2181496..2182269 (-)	774	WP_000497298.1	TatD family hydrolase	-
F3P16_RS10280 (F3P16_10280)	-	2182287..2182628 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
F3P16_RS10285 (F3P16_10285)	-	2182640..2183620 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
F3P16_RS10290 (F3P16_10290)	kdsB	2183632..2184393 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=386782 F3P16_RS10255 WP_000594572.1 2179215..2179916(-) (xcpW) [Acinetobacter baumannii strain K09-14]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=386782 F3P16_RS10255 WP_000594572.1 2179215..2179916(-) (xcpW) [Acinetobacter baumannii strain K09-14]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991