Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | F3P16_RS01605 | Genome accession | NZ_CP043953 |
| Coordinates | 341103..341585 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046417.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain K09-14 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 336103..346585
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3P16_RS01595 (F3P16_01595) | pilX | 336406..337224 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| F3P16_RS01600 (F3P16_01600) | pilY1 | 337236..341090 (+) | 3855 | WP_215896610.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| F3P16_RS01605 (F3P16_01605) | pilY2 | 341103..341585 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| F3P16_RS01610 (F3P16_01610) | pilE | 341582..342007 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| F3P16_RS01615 (F3P16_01615) | rpsP | 342154..342405 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| F3P16_RS01620 (F3P16_01620) | rimM | 342425..342973 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| F3P16_RS01625 (F3P16_01625) | trmD | 343020..343760 (+) | 741 | WP_005109350.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| F3P16_RS01630 (F3P16_01630) | rplS | 343968..344336 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| F3P16_RS01635 (F3P16_01635) | - | 344390..345331 (-) | 942 | WP_136512430.1 | lipase family alpha/beta hydrolase | - |
| F3P16_RS01640 (F3P16_01640) | - | 345446..346480 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17516.77 Da Isoelectric Point: 8.4817
>NTDB_id=386772 F3P16_RS01605 WP_001046417.1 341103..341585(+) (pilY2) [Acinetobacter baumannii strain K09-14]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=386772 F3P16_RS01605 WP_001046417.1 341103..341585(+) (pilY2) [Acinetobacter baumannii strain K09-14]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
98.125 |
100 |
0.981 |
| comE | Acinetobacter baylyi ADP1 |
41.279 |
100 |
0.444 |