Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   F2A31_RS14450 Genome accession   NZ_CP043909
Coordinates   3102401..3103966 (+) Length   521 a.a.
NCBI ID   WP_150027183.1    Uniprot ID   A0A5P1UXK0
Organism   Acinetobacter suaedae strain C16S1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3097401..3108966
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F2A31_RS14430 (F2A31_14430) - 3097913..3099214 (+) 1302 WP_026056262.1 homoserine dehydrogenase -
  F2A31_RS14435 (F2A31_14435) thrC 3099273..3100412 (+) 1140 WP_150027177.1 threonine synthase -
  F2A31_RS14440 (F2A31_14440) pbpG 3100472..3101536 (-) 1065 WP_150027179.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  F2A31_RS14445 (F2A31_14445) - 3101747..3102382 (+) 636 WP_150027181.1 response regulator -
  F2A31_RS14450 (F2A31_14450) pilS 3102401..3103966 (+) 1566 WP_150027183.1 PAS domain-containing sensor histidine kinase Regulator
  F2A31_RS14455 (F2A31_14455) pilR 3103989..3105416 (+) 1428 WP_150027185.1 sigma-54 dependent transcriptional regulator Regulator
  F2A31_RS14460 (F2A31_14460) - 3105468..3106634 (-) 1167 WP_150027187.1 S41 family peptidase -
  F2A31_RS14465 (F2A31_14465) gpmI 3106644..3108188 (-) 1545 WP_150027189.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59683.86 Da        Isoelectric Point: 6.3578

>NTDB_id=386489 F2A31_RS14450 WP_150027183.1 3102401..3103966(+) (pilS) [Acinetobacter suaedae strain C16S1]
MLGKVAPSISQTIYQLGMWYSGYRLIVSICLLLIFLLTAEQLTNNYIYPLLYLYTLIAYIGFNISQLFFLKIFSIHVNKQ
LIAIFLIDVICLSIITFATGGPNLQLSLLYVIIIFASAILLNAQLSLVVTLLAVIMIVYQRFIGNLLDYNNLSHLSNSLL
LVFLFFVVYVIGRIAVQRFKILEALTFHQSIEIHQLQNINRYILDQIEDGYLVLDESNHIVLTNPAANTLLGIHLPVSHE
KTPLIKWQPDLFELIKFSDLEDGEEFTFESQQSLYTIHVCVKHLIVPEQALILLILKDAQKLTQRVQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELFSESDPHQQQMLSRMIRKQTKRIDRIVEDTLAMARNKPTEPQNIHLTEFFESLFDEDLADVK
HMIQLELSEEIQILFDDKQLRQVLINLVRNALRHNASNMPYIEIKVHTEETRVWIDVIDFGLGVAKRDLSQLFKPFFSTE
IKGTGLGLYLSHSFCEANHAKLTYVERQQGACFRIECSIIN

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=386489 F2A31_RS14450 WP_150027183.1 3102401..3103966(+) (pilS) [Acinetobacter suaedae strain C16S1]
ATGTTGGGAAAAGTTGCGCCTTCCATATCACAAACCATTTACCAACTTGGCATGTGGTACAGTGGATATCGCCTCATTGT
TTCGATTTGCTTATTACTTATCTTTCTTTTAACTGCAGAACAACTCACAAACAATTATATCTATCCACTCTTATATTTAT
ATACGCTGATTGCTTATATCGGATTTAATATCAGTCAGCTTTTTTTTCTTAAAATCTTTTCTATACATGTCAATAAACAA
TTAATTGCTATCTTTCTTATTGATGTCATCTGCTTAAGTATCATTACCTTTGCAACAGGTGGTCCAAACTTACAACTTAG
CCTACTCTATGTCATTATTATTTTTGCCTCAGCAATCCTATTAAACGCCCAACTTTCACTGGTGGTGACCCTACTCGCAG
TCATCATGATTGTATATCAGCGATTCATTGGAAATTTATTAGACTACAATAACTTAAGCCATTTAAGTAATAGCTTACTT
TTGGTTTTTTTATTTTTCGTCGTTTATGTGATTGGCCGAATCGCAGTACAACGCTTTAAAATTTTAGAAGCGCTTACTTT
CCATCAATCCATTGAAATTCATCAACTGCAAAACATTAATCGCTATATATTAGATCAAATTGAAGATGGATATCTGGTTT
TAGACGAAAGTAATCATATTGTTTTGACTAATCCTGCTGCAAATACCTTACTTGGCATTCACTTACCCGTTTCTCATGAA
AAAACTCCTTTAATCAAATGGCAACCCGATCTATTTGAATTGATCAAATTTAGTGATTTAGAAGATGGCGAGGAGTTTAC
TTTTGAGTCACAGCAAAGTTTGTATACGATACATGTATGCGTCAAACATTTAATTGTTCCAGAACAAGCACTTATATTGC
TTATTCTCAAAGATGCCCAAAAGCTAACCCAACGCGTACAACAACTCAAACTAGCGGCTCTAGGGCAACTCTCAGCGAGT
ATCGCACATGAAATCCGTAATCCTTTAGCTGCAATTGTGCAAGCCAATGAACTTTTCAGTGAAAGTGACCCACATCAACA
ACAAATGCTGTCTCGCATGATCCGGAAACAGACCAAACGCATCGATCGCATTGTAGAAGATACTTTGGCAATGGCACGCA
ATAAGCCAACTGAACCACAAAACATTCATCTTACTGAGTTCTTTGAAAGTTTATTTGATGAAGATCTAGCAGACGTAAAA
CACATGATTCAGCTTGAGCTTTCAGAGGAAATTCAAATCTTATTTGATGATAAACAGTTACGCCAAGTGCTGATTAATTT
AGTGAGAAATGCATTACGGCACAATGCTTCGAATATGCCATATATTGAAATCAAGGTACATACTGAAGAAACACGAGTTT
GGATTGATGTTATCGATTTTGGTTTAGGGGTAGCAAAAAGAGACCTTTCTCAGCTTTTTAAACCATTTTTTAGTACCGAA
ATCAAAGGAACTGGTTTAGGATTGTATTTGTCTCATAGTTTCTGTGAGGCAAATCATGCAAAGCTCACTTATGTAGAGCG
ACAACAAGGAGCATGCTTCAGGATTGAATGCTCAATAATTAATTGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-516)

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P1UXK0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

64.008

98.656

0.631

Multiple sequence alignment