Detailed information NTG0386319

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: HHJ56_RS02105
• Genome accession: NZ_CP051642
• Coordinates: 397397..400225 (-)
• Length: 942 a.a.
• NCBI ID: WP_035687804.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain ADL-AP01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 392397..405225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ56_RS02080 (HHJ56_02080)	hutX	393565..394074 (+)	510	WP_035687791.1	heme utilization cystosolic carrier protein HutX	-
HHJ56_RS02085 (HHJ56_02085)	hutZ	394068..394586 (+)	519	WP_035687799.1	heme utilization protein HutZ	-
HHJ56_RS02090 (HHJ56_02090)	mreD	394613..395095 (-)	483	WP_035687802.1	rod shape-determining protein MreD	-
HHJ56_RS02095 (HHJ56_02095)	mreC	395095..396132 (-)	1038	WP_017805686.1	rod shape-determining protein MreC	-
HHJ56_RS02100 (HHJ56_02100)	-	396205..397251 (-)	1047	WP_017805687.1	rod shape-determining protein	-
HHJ56_RS02105 (HHJ56_02105)	uvrA	397397..400225 (-)	2829	WP_035687804.1	excinuclease ABC subunit UvrA	Machinery gene
HHJ56_RS02110 (HHJ56_02110)	ssb	400392..400907 (+)	516	WP_035687806.1	single-stranded DNA-binding protein	Machinery gene
HHJ56_RS11885 (HHJ56_02115)	-	401053..402127 (-)	1075	Protein_411	alpha/beta hydrolase	-
HHJ56_RS02120 (HHJ56_02120)	-	402409..404166 (+)	1758	WP_035687809.1	DUF262 domain-containing protein	-
HHJ56_RS02125 (HHJ56_02125)	-	404295..404640 (+)	346	Protein_413	LysR family transcriptional regulator	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104126.00 Da
• Isoelectric Point: 7.3294

>NTDB_id=386319 HHJ56_RS02105 WP_035687804.1 397397..400225(-) (uvrA) [Avibacterium paragallinarum strain ADL-AP01]
MEKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPNHHIPLAAQTISQMVDKVLALPEESRMMLLAPVVKDRKG
EHIKILEHIAAQGYIRARIDGEICDLSDPPKLALQKKHTIEVVVDRFKVRPDLATRLAESFETALELSGGTAVVANMDDP
KAEELLFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEKRVVQNPSISLAGGAIKGWDRRNFYYYQM
LTSLAKHYGFNVESPFEELPKKIQHIILHGSGKEEIEFQYMNDRGDVVLRRHSFEGILNNMARRYKETESMAVREELAKH
ISTRPCKDCGGSRLRQEARNVFIGETNLPEVSEKSIGEAFNFVDSLTLSGQRAQIADKILKEIKERLQFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAILAADHIIDI
GPGAGVHGGNVVAQGTAQEIMQDPNSLTGKFLSGKEKIEIPQKRTALDKKKILKLKGASGNNLKNVNLEIPVGLFTCVTG
VSGSGKSTLINDTLFPLAQSALNRAENAQAAPYKSIDGLEFFDKVIDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIRYKGKTINQVLDMTVEEAREFF
DAIPQIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILDEPTTGLHFADIKQLLDVLHRLRD
QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIATGTPEQVAEVKGSHTARFLKQILKK

Nucleotide

• Length: 2829 bp

>NTDB_id=386319 HHJ56_RS02105 WP_035687804.1 397397..400225(-) (uvrA) [Avibacterium paragallinarum strain ADL-AP01]
ATGGAAAAAATAGAAGTAAGAGGGGCGAGAACCCACAATTTAAAAAATATTAATTTAACCATCCCCCGCGATAAATTGAT
TGTGATCACGGGGCTATCTGGTTCAGGCAAATCCTCTCTAGCCTTTGACACCCTATATGCAGAAGGACAACGCCGTTATG
TAGAATCCCTGTCGGCTTATGCACGTCAATTTTTATCGTTGATGGAAAAACCAGACGTGGATCATATTGAAGGTTTATCC
CCCGCGATTTCTATTGAGCAAAAATCAACATCTCACAACCCACGTTCTACAGTGGGAACAATCACGGAAATTCATGATTA
TTTGCGTTTATTATTTGCCCGTGTGGGGGAGCCTCGCTGCCCGAATCACCATATCCCTTTGGCAGCACAAACAATTAGCC
AGATGGTGGATAAGGTGCTGGCATTGCCGGAAGAAAGCCGAATGATGTTGCTTGCCCCAGTGGTGAAAGATCGCAAAGGG
GAACATATTAAAATTTTAGAACATATTGCCGCGCAAGGTTATATCCGCGCCAGAATTGATGGGGAAATTTGCGATCTTTC
TGATCCACCAAAATTAGCATTACAAAAAAAGCACACCATTGAAGTTGTGGTGGATCGCTTTAAAGTTCGTCCAGATTTGG
CAACCCGCTTAGCGGAATCATTTGAAACTGCGTTAGAACTTTCTGGTGGCACGGCAGTGGTGGCGAATATGGACGATCCG
AAAGCGGAAGAATTGCTGTTTTCCGCAAACTTTGCTTGTCCGCATTGTGGCTATTCTGTACCAGAACTTGAGCCTCGCTT
ATTTTCCTTTAATAACCCTGCGGGGGCTTGCCCGACTTGTGATGGCTTGGGGGTTCAGCAATACTTTGATGAAAAACGCG
TGGTGCAAAATCCAAGCATTTCCTTAGCTGGTGGGGCGATTAAAGGTTGGGATCGGCGTAATTTCTATTATTATCAGATG
CTCACCTCATTGGCAAAACATTATGGTTTTAATGTGGAAAGCCCATTCGAAGAATTACCAAAAAAAATTCAACACATTAT
TCTGCACGGCTCAGGCAAAGAAGAGATTGAATTCCAATATATGAATGATCGCGGTGATGTCGTGCTACGCCGTCATAGCT
TTGAGGGCATTCTCAATAATATGGCTCGCCGTTATAAAGAAACCGAATCTATGGCGGTGCGTGAAGAGTTAGCGAAACAT
ATCAGCACTCGCCCTTGTAAAGATTGCGGGGGTTCTCGCTTACGTCAAGAGGCTCGCAATGTATTTATTGGGGAAACAAA
TCTTCCCGAAGTTTCTGAAAAAAGTATTGGGGAAGCCTTTAACTTTGTAGATAGCCTAACCTTAAGCGGACAACGTGCTC
AAATTGCAGACAAAATTTTGAAAGAAATCAAAGAGCGGTTGCAATTTTTAGTCAATGTTGGCTTAAATTACCTCTCCCTT
TCCCGATCCGCCGAAACCCTTTCTGGCGGTGAAGCACAACGTATTCGCCTCGCAAGCCAAATCGGGGCGGGTTTAGTGGG
GGTGATGTATGTACTTGATGAGCCTTCTATTGGCTTACATCAACGCGATAATGAGCGTTTACTTAACACGTTGATTCATC
TAAGAAACTTAGGGAATACAGTGATTGTGGTAGAACACGATGAAGATGCTATTCTTGCTGCGGATCATATTATTGATATT
GGACCAGGTGCGGGCGTACACGGCGGCAATGTTGTTGCTCAAGGCACTGCTCAAGAAATCATGCAAGATCCAAATTCTTT
GACGGGGAAATTTTTATCTGGAAAGGAAAAAATAGAAATTCCGCAAAAACGCACCGCACTTGATAAAAAGAAAATCTTAA
AACTTAAAGGGGCTTCGGGCAACAACTTAAAAAATGTCAATTTAGAAATCCCCGTTGGATTATTTACTTGCGTCACCGGC
GTATCTGGTTCGGGCAAATCCACATTAATTAACGACACTTTATTTCCTTTAGCACAAAGTGCATTAAACCGTGCTGAAAA
CGCCCAAGCCGCACCATACAAATCGATCGATGGACTCGAATTTTTTGACAAAGTGATTGATATTGACCAAAGCCCGATTG
GACGTACACCGCGTTCAAATCCTGCTACTTATACGGGATTATTCACCCCTATCCGCGAATTATTCGCTGGTGTACCAGAA
GCTCGAGCAAGAGGCTACAATCCCGGTCGATTTAGCTTTAACGTGCGAGGCGGACGCTGTGAAGCCTGTCAAGGAGATGG
GGTAATCAAAGTAGAAATGCACTTTTTACCTGATGTTTATGTCCCTTGTGATCAATGCAAAGGAAAACGTTACAATCGTG
AAACCTTAGAAATTCGTTACAAAGGCAAAACGATTAACCAAGTGTTGGATATGACAGTGGAAGAAGCTCGTGAGTTTTTT
GATGCTATCCCACAAATTGCTCGCAAATTGCAAACCTTAATGGATGTTGGGCTTTCTTATATCCGTTTAGGGCAATCTTC
CACCACGCTTTCTGGTGGTGAAGCACAACGCGTAAAATTAGCCACTGAGCTGTCTAAACGAGATACGGGAAAAACATTGT
ATATTCTTGACGAGCCAACAACAGGTTTGCATTTTGCCGATATTAAACAACTGCTTGATGTCTTGCACCGCTTGCGTGAC
CAAGGTAATACGATTGTGGTGATTGAGCATAATTTAGATGTTATCAAAACTGCAGATTGGATTGTAGATCTTGGGCCTGA
AGGTGGTAGTGGAGGCGGGCAAATCATTGCGACAGGCACGCCAGAACAAGTTGCGGAGGTTAAAGGTTCGCATACAGCAC
GCTTCTTAAAGCAAATACTCAAAAAGTAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-399)

• UvrA interaction domain (UvrA_inter) (130-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	58.191	99.788	0.581
uvrA	Streptococcus pneumoniae TIGR4	58.191	99.788	0.581
uvrA	Streptococcus pneumoniae D39	58.191	99.788	0.581