Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | F1612_RS06635 | Genome accession | NZ_CP043843 |
| Coordinates | 1288914..1289888 (+) | Length | 324 a.a. |
| NCBI ID | WP_000697227.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NCCP 16830 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1283914..1294888
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1612_RS06600 (F1612_06735) | rpmG | 1284374..1284523 (+) | 150 | WP_001265709.1 | 50S ribosomal protein L33 | - |
| F1612_RS06605 (F1612_06740) | - | 1284732..1285271 (+) | 540 | WP_000164546.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| F1612_RS06610 (F1612_06745) | - | 1285283..1286746 (+) | 1464 | WP_158172984.1 | rhomboid family protein | - |
| F1612_RS06615 (F1612_06750) | - | 1286727..1286930 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| F1612_RS06620 (F1612_06755) | - | 1286927..1287913 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| F1612_RS06625 (F1612_06760) | - | 1287913..1288242 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| F1612_RS06630 (F1612_06765) | - | 1288239..1288862 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| F1612_RS06635 (F1612_06770) | comGA | 1288914..1289888 (+) | 975 | WP_000697227.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| F1612_RS06640 (F1612_06775) | comGB | 1289860..1290930 (+) | 1071 | WP_158172985.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| F1612_RS06645 (F1612_06780) | comGC | 1290944..1291255 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| F1612_RS06650 (F1612_06785) | comGD | 1291233..1291679 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| F1612_RS06655 (F1612_06790) | comGE | 1291666..1291965 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| F1612_RS06660 (F1612_06795) | comGF | 1291883..1292380 (+) | 498 | WP_001829055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| F1612_RS06665 (F1612_06800) | - | 1292477..1292623 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| F1612_RS06670 (F1612_06805) | - | 1292613..1293137 (+) | 525 | WP_001015123.1 | shikimate kinase | - |
| F1612_RS06675 (F1612_06810) | gcvT | 1293296..1294387 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36842.96 Da Isoelectric Point: 8.8508
>NTDB_id=386166 F1612_RS06635 WP_000697227.1 1288914..1289888(+) (comGA) [Staphylococcus aureus strain NCCP 16830]
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYLF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQPQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYLF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQPQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=386166 F1612_RS06635 WP_000697227.1 1288914..1289888(+) (comGA) [Staphylococcus aureus strain NCCP 16830]
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCTTTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACCACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGACCAACTGGTTCAGGAAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGTATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATAATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCTTTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACCACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGACCAACTGGTTCAGGAAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGTATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATAATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
99.383 |
100 |
0.994 |
| comGA | Staphylococcus aureus N315 |
99.383 |
100 |
0.994 |