Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | F1612_RS03645 | Genome accession | NZ_CP043843 |
| Coordinates | 737725..738120 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NCCP 16830 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 732725..743120
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1612_RS03615 (F1612_03695) | - | 733985..734389 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| F1612_RS03620 (F1612_03700) | - | 734725..734817 (+) | 93 | WP_031929694.1 | hypothetical protein | - |
| F1612_RS03625 (F1612_03705) | - | 734949..735182 (+) | 234 | WP_158172953.1 | DUF1146 family protein | - |
| F1612_RS03630 (F1612_03710) | murA | 735293..736558 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| F1612_RS03635 (F1612_03715) | fabZ | 736592..737032 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| F1612_RS03640 (F1612_03720) | - | 737091..737531 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| F1612_RS03645 (F1612_03725) | ssb | 737725..738120 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| F1612_RS03650 (F1612_03730) | sceD | 738509..739204 (+) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| F1612_RS03655 (F1612_03735) | tenA | 739728..740417 (+) | 690 | WP_045173472.1 | thiaminase II | - |
| F1612_RS03660 (F1612_03740) | thiD | 740410..741240 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| F1612_RS03665 (F1612_03745) | thiM | 741224..742015 (+) | 792 | WP_045173475.1 | hydroxyethylthiazole kinase | - |
| F1612_RS03670 (F1612_03750) | thiE | 742017..742658 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=386151 F1612_RS03645 WP_000932694.1 737725..738120(+) (ssb) [Staphylococcus aureus strain NCCP 16830]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=386151 F1612_RS03645 WP_000932694.1 737725..738120(+) (ssb) [Staphylococcus aureus strain NCCP 16830]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |