Detailed information NTG0038513

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BAMF_RS37785
• Genome accession: NC_014551
• Coordinates: 3446831..3447994 (-)
• Length: 387 a.a.
• NCBI ID: WP_013353787.1
• Uniprot ID: A0A9P1JKJ4
• Organism: Bacillus amyloliquefaciens DSM 7 = ATCC 23350
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3441831..3452994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMF_RS37755 (BAMF_3385)	-	3442097..3442516 (-)	420	WP_013353782.1	TIGR03826 family flagellar region protein	-
BAMF_RS37760 (BAMF_3386)	comFC	3442590..3443279 (-)	690	WP_198315882.1	ComF family protein	Machinery gene
BAMF_RS37765 (BAMF_3387)	-	3443285..3443569 (-)	285	WP_013353784.1	late competence development ComFB family protein	-
BAMF_RS37770 (BAMF_3388)	comFA	3443628..3445013 (-)	1386	WP_013353785.1	DEAD/DEAH box helicase	Machinery gene
BAMF_RS37775 (BAMF_3389)	-	3445120..3445968 (-)	849	WP_013353786.1	DegV family protein	-
BAMF_RS37780 (BAMF_3390)	degU	3446065..3446754 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BAMF_RS37785 (BAMF_3391)	degS	3446831..3447994 (-)	1164	WP_013353787.1	two-component sensor histidine kinase DegS	Regulator
BAMF_RS37790 (BAMF_3392)	-	3448217..3448864 (+)	648	WP_013353788.1	YigZ family protein	-
BAMF_RS37795 (BAMF_3393)	-	3448869..3450143 (+)	1275	WP_013353789.1	LCP family protein	-
BAMF_RS37800 (BAMF_3394)	-	3450243..3451319 (-)	1077	WP_013353790.1	glycosyltransferase family 4 protein	-
BAMF_RS37805 (BAMF_3395)	tuaH	3451452..3452648 (-)	1197	WP_013353791.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.85 Da
• Isoelectric Point: 7.1379

>NTDB_id=38513 BAMF_RS37785 WP_013353787.1 3446831..3447994(-) (degS) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKEAKQKKNKSFGLLGMKERVDLLEGTITIDSKLGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=38513 BAMF_RS37785 WP_013353787.1 3446831..3447994(-) (degS) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTCGAAGTACATACCCGGCATGCAAGAAACCGCTTGTCGGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTGCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCGGCTCAAATGCTGGCAAATGTTATGATGAGATCGGAATTGATAGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGCTTTCAGGAAATCAGAAATCTTCGCCAGAATGTGCGGAATGCTCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCGCTGAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACTGCTGATTTTGTGGTTCTTATTATTAAGGACAACGGAAAAGGCTTTGATATCAAGGAAGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTCGAAGGAACGATAACGATAGACTCTAAACTAGGTCTTG
GGACATTTATCATGATTAAGGTTCCTTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948