Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   FTN78_RS11500 Genome accession   NZ_CP043523
Coordinates   2230495..2231781 (+) Length   428 a.a.
NCBI ID   WP_150891149.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2225495..2236781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FTN78_RS11470 (FTN78_chr2297) - 2225959..2226906 (+) 948 WP_010906367.1 IS30 family transposase -
  FTN78_RS11475 (FTN78_chr2298) rlmH 2226945..2227424 (+) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FTN78_RS11480 (FTN78_chr2299) - 2227443..2228140 (+) 698 Protein_2155 DNA alkylation repair protein -
  FTN78_RS11485 (FTN78_chr2300) yajC 2228235..2228567 (+) 333 WP_003130588.1 preprotein translocase subunit YajC -
  FTN78_RS11490 (FTN78_chr2301) - 2228939..2229673 (+) 735 WP_010906326.1 isoprenyl transferase -
  FTN78_RS11495 (FTN78_chr2302) - 2229673..2230476 (+) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  FTN78_RS11500 (FTN78_chr2303) eeP 2230495..2231781 (+) 1287 WP_150891149.1 RIP metalloprotease RseP Regulator
  FTN78_RS11505 (FTN78_chr2304) - 2231851..2233701 (+) 1851 WP_010906324.1 proline--tRNA ligase -
  FTN78_RS11510 (FTN78_chr2305) - 2233717..2235048 (+) 1332 WP_010906323.1 FAD/NAD(P)-binding oxidoreductase -
  FTN78_RS11515 (FTN78_chr2306) - 2235054..2235590 (+) 537 WP_010906322.1 hypothetical protein -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46450.02 Da        Isoelectric Point: 6.7739

>NTDB_id=384793 FTN78_RS11500 WP_150891149.1 2230495..2231781(+) (eeP) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLKNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGFPAIVYLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=384793 FTN78_RS11500 WP_150891149.1 2230495..2231781(+) (eeP) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCCATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGAAAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATTGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGCCCAGTTGCTATTTATCAACTCAGTGGTCAAGCCGC
GAGAGCAGGTTTTCCAGCTATTGTCTATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(218-269)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.381

100

0.568

  eeP Streptococcus thermophilus LMD-9

56.148

100

0.565


Multiple sequence alignment