Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | CVCAS_RS01715 | Genome accession | NC_017486 |
| Coordinates | 327827..328423 (+) | Length | 198 a.a. |
| NCBI ID | WP_003131648.1 | Uniprot ID | Q9CIL6 |
| Organism | Lactococcus lactis subsp. lactis CV56 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 322827..333423
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CVCAS_RS01700 (CVCAS_0322) | ahpC | 323198..323761 (+) | 564 | WP_014570377.1 | alkyl hydroperoxide reductase subunit C | - |
| CVCAS_RS01705 (CVCAS_0323) | ahpF | 323828..325357 (+) | 1530 | WP_010905291.1 | alkyl hydroperoxide reductase subunit F | - |
| CVCAS_RS01710 (CVCAS_0324) | - | 325523..327688 (+) | 2166 | WP_003131649.1 | penicillin-binding transpeptidase domain-containing protein | - |
| CVCAS_RS01715 (CVCAS_0325) | recR | 327827..328423 (+) | 597 | WP_003131648.1 | recombination mediator RecR | Machinery gene |
| CVCAS_RS01720 (CVCAS_0326) | - | 328540..329589 (+) | 1050 | WP_010905293.1 | D-alanine--D-alanine ligase | - |
| CVCAS_RS01725 (CVCAS_0327) | murF | 329664..330986 (+) | 1323 | WP_010905294.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| CVCAS_RS01730 (CVCAS_0328) | - | 331156..332808 (+) | 1653 | WP_003131645.1 | peptide ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21909.22 Da Isoelectric Point: 4.8226
>NTDB_id=38434 CVCAS_RS01715 WP_003131648.1 327827..328423(+) (recR) [Lactococcus lactis subsp. lactis CV56]
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI
Nucleotide
Download Length: 597 bp
>NTDB_id=38434 CVCAS_RS01715 WP_003131648.1 327827..328423(+) (recR) [Lactococcus lactis subsp. lactis CV56]
ATGTATTATCCTGAACCTATTGCTCGCCTGATTGAGTCGTTTTCAAAATTACCAGGGATTGGTCAAAAAACAGCGACTCG
ATTGGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCAAAAAATCTTCTTTCAGCAAAACGGGATT
TGAGTTTTTGCTCGATTTGTGGGAATTTAACAGAAAGTGATCCTTGCGCCATTTGTACCGACCCAACGCGTGATCGAACA
ACTATATTGGTCGTTGAAGAATCTAAAGATGTTCTTGCTATGGAAAAAATTCGGGAATATCGAGGACTTTATCATGTTTT
GCATGGTACGATTAGTCCAATGAATGGGATTTCTCCTGATGAAATTAATGTTAAAACATTGATTACAAGATTAATGGATT
CAGAGGTTAAAGAAGTGATCATCGCAACTAATGCCACTTCTGACGGAGAAGCAACCGCCATGTATCTGGCTCGAATGATT
AAGCCTGCAGGAATTAAAGTGACTCGCTTGGCTCGTGGATTAGCTGTAGGCTCTGATATAGAATACGCAGATGAAATTAC
TTTATCAAAAGCGGTAGAGAATCGGTTGGAAATTTGA
ATGTATTATCCTGAACCTATTGCTCGCCTGATTGAGTCGTTTTCAAAATTACCAGGGATTGGTCAAAAAACAGCGACTCG
ATTGGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCAAAAAATCTTCTTTCAGCAAAACGGGATT
TGAGTTTTTGCTCGATTTGTGGGAATTTAACAGAAAGTGATCCTTGCGCCATTTGTACCGACCCAACGCGTGATCGAACA
ACTATATTGGTCGTTGAAGAATCTAAAGATGTTCTTGCTATGGAAAAAATTCGGGAATATCGAGGACTTTATCATGTTTT
GCATGGTACGATTAGTCCAATGAATGGGATTTCTCCTGATGAAATTAATGTTAAAACATTGATTACAAGATTAATGGATT
CAGAGGTTAAAGAAGTGATCATCGCAACTAATGCCACTTCTGACGGAGAAGCAACCGCCATGTATCTGGCTCGAATGATT
AAGCCTGCAGGAATTAAAGTGACTCGCTTGGCTCGTGGATTAGCTGTAGGCTCTGATATAGAATACGCAGATGAAATTAC
TTTATCAAAAGCGGTAGAGAATCGGTTGGAAATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
78.283 |
100 |
0.783 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
59.596 |
100 |
0.596 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |